Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2878 |
Symbol | |
ID | 4253449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3433045 |
End bp | 3433536 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119513 |
Product | hypothetical protein |
Protein accession | YP_735006 |
Protein GI | 113971213 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00543287 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000193701 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCGAATAT TGTGTCTTTT AGTCTGTCTT ATTTTTGTTC CGGCCTTGTA TCCTACGTCT GCACACGCCA ACTCGGGGGA AATGCCAGAA GAACAGCAGT TAGCCGTAAA ATACATGAAT GCGCTAACCG AGCACGACTA TCAAACACTC GGCAAATTCT ATAACCGTGA TACCGTCTTC TTCGATAAAA CCGCCAATCG TAAATACACG GGTGGACGAT TTATTATCGA CTTCCTCGAG CGCGCCCACG AAGGTGTACT CGAATATGAT TTCAATATTG AGCATATGTA TAACGCTGGC TCCCTGGTGG TGATGATTGG TAACTATCAC TTTAAGGGAC CCGGCGAGCA GTTTGGCAAA CCCGGAAAAA TTATTGATGT CGCCATTCCA GGGGTCACCA GCCTTAAGCT CGATATGCGT AATCACAGGG TCACAGAGCA TGTGGATCTG ATTGATTACC AGACCATGTC AGACCAATTA GCGATGCAGT AG
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Protein sequence | MRILCLLVCL IFVPALYPTS AHANSGEMPE EQQLAVKYMN ALTEHDYQTL GKFYNRDTVF FDKTANRKYT GGRFIIDFLE RAHEGVLEYD FNIEHMYNAG SLVVMIGNYH FKGPGEQFGK PGKIIDVAIP GVTSLKLDMR NHRVTEHVDL IDYQTMSDQL AMQ
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