Gene Shewmr4_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2878 
Symbol 
ID4253449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3433045 
End bp3433536 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID638119513 
Producthypothetical protein 
Protein accessionYP_735006 
Protein GI113971213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00543287 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000193701 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCGAATAT TGTGTCTTTT AGTCTGTCTT ATTTTTGTTC CGGCCTTGTA TCCTACGTCT 
GCACACGCCA ACTCGGGGGA AATGCCAGAA GAACAGCAGT TAGCCGTAAA ATACATGAAT
GCGCTAACCG AGCACGACTA TCAAACACTC GGCAAATTCT ATAACCGTGA TACCGTCTTC
TTCGATAAAA CCGCCAATCG TAAATACACG GGTGGACGAT TTATTATCGA CTTCCTCGAG
CGCGCCCACG AAGGTGTACT CGAATATGAT TTCAATATTG AGCATATGTA TAACGCTGGC
TCCCTGGTGG TGATGATTGG TAACTATCAC TTTAAGGGAC CCGGCGAGCA GTTTGGCAAA
CCCGGAAAAA TTATTGATGT CGCCATTCCA GGGGTCACCA GCCTTAAGCT CGATATGCGT
AATCACAGGG TCACAGAGCA TGTGGATCTG ATTGATTACC AGACCATGTC AGACCAATTA
GCGATGCAGT AG
 
Protein sequence
MRILCLLVCL IFVPALYPTS AHANSGEMPE EQQLAVKYMN ALTEHDYQTL GKFYNRDTVF 
FDKTANRKYT GGRFIIDFLE RAHEGVLEYD FNIEHMYNAG SLVVMIGNYH FKGPGEQFGK
PGKIIDVAIP GVTSLKLDMR NHRVTEHVDL IDYQTMSDQL AMQ