Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2813 |
Symbol | |
ID | 4253384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3367421 |
End bp | 3368170 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638119448 |
Product | hypothetical protein |
Protein accession | YP_734941 |
Protein GI | 113971148 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAG CTGGTATTTC CTATCGTTGG CGAGTAAACG CCATTTTGTT ACTGCTACTC TTTGCTCCCT CTTCCTTTGC CCAATTACTC AAGTACAACA TCACCGGCTC TTATTCTTGG TACCCCTATT TTATTGCCAA TCAGCCAGAG GCGCCGGGAA TGATTACCGA ATTAATTCCG CTGATTTTAT CCTTAGCCAA TATCGAGGGA GAAAATCTCT CCTTGCCGCC CAAACGGACG AACAACGCCC TTGAAACGGG CCAGTTAGAC TTTGATGTGG TGAGCCCAAG TTGGTTTGCA GATCAAGACT TTGGCCCCTT ATTCGTTAAA TCCGATCCCA TTATGCCCAT CACTGAGTAC ATAGTGACAA GGCCCGAACA TGTCGAATCA TTTAAGGAAA TTTCCGAAAT CAAAGGCAAG CAAATCGGGA CTGTTCGAGG ATATTTGTAC CACGATGACA AGGAGTTTAT CCGTGTCGAT TTTACTTCAG AGCAAGAGCT GATTAAGGCA TTAGATAAAC ACCGCATCAC TGCCATTATC TCAGGTAACT ATCCCGCTTT GTACTGGTCG AACAAACTTA AGATCCCCGT TGGATTGGCC GCGGTGCATT CCGATGGCGT ATTGGTGCTA AGGCTACGTA AGGAGCATGC CGATCTACTG CCCGCACTCA ATCACGCGAT AGCGCAGCTT AAAGCCGATG GAAAGGTGGA GCAGATTATC CAGAAATACA CCCAAGCCTT TGCCAGCTAA
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Protein sequence | MRKAGISYRW RVNAILLLLL FAPSSFAQLL KYNITGSYSW YPYFIANQPE APGMITELIP LILSLANIEG ENLSLPPKRT NNALETGQLD FDVVSPSWFA DQDFGPLFVK SDPIMPITEY IVTRPEHVES FKEISEIKGK QIGTVRGYLY HDDKEFIRVD FTSEQELIKA LDKHRITAII SGNYPALYWS NKLKIPVGLA AVHSDGVLVL RLRKEHADLL PALNHAIAQL KADGKVEQII QKYTQAFAS
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