Gene Shewmr4_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2813 
Symbol 
ID4253384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3367421 
End bp3368170 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content47% 
IMG OID638119448 
Producthypothetical protein 
Protein accessionYP_734941 
Protein GI113971148 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAG CTGGTATTTC CTATCGTTGG CGAGTAAACG CCATTTTGTT ACTGCTACTC 
TTTGCTCCCT CTTCCTTTGC CCAATTACTC AAGTACAACA TCACCGGCTC TTATTCTTGG
TACCCCTATT TTATTGCCAA TCAGCCAGAG GCGCCGGGAA TGATTACCGA ATTAATTCCG
CTGATTTTAT CCTTAGCCAA TATCGAGGGA GAAAATCTCT CCTTGCCGCC CAAACGGACG
AACAACGCCC TTGAAACGGG CCAGTTAGAC TTTGATGTGG TGAGCCCAAG TTGGTTTGCA
GATCAAGACT TTGGCCCCTT ATTCGTTAAA TCCGATCCCA TTATGCCCAT CACTGAGTAC
ATAGTGACAA GGCCCGAACA TGTCGAATCA TTTAAGGAAA TTTCCGAAAT CAAAGGCAAG
CAAATCGGGA CTGTTCGAGG ATATTTGTAC CACGATGACA AGGAGTTTAT CCGTGTCGAT
TTTACTTCAG AGCAAGAGCT GATTAAGGCA TTAGATAAAC ACCGCATCAC TGCCATTATC
TCAGGTAACT ATCCCGCTTT GTACTGGTCG AACAAACTTA AGATCCCCGT TGGATTGGCC
GCGGTGCATT CCGATGGCGT ATTGGTGCTA AGGCTACGTA AGGAGCATGC CGATCTACTG
CCCGCACTCA ATCACGCGAT AGCGCAGCTT AAAGCCGATG GAAAGGTGGA GCAGATTATC
CAGAAATACA CCCAAGCCTT TGCCAGCTAA
 
Protein sequence
MRKAGISYRW RVNAILLLLL FAPSSFAQLL KYNITGSYSW YPYFIANQPE APGMITELIP 
LILSLANIEG ENLSLPPKRT NNALETGQLD FDVVSPSWFA DQDFGPLFVK SDPIMPITEY
IVTRPEHVES FKEISEIKGK QIGTVRGYLY HDDKEFIRVD FTSEQELIKA LDKHRITAII
SGNYPALYWS NKLKIPVGLA AVHSDGVLVL RLRKEHADLL PALNHAIAQL KADGKVEQII
QKYTQAFAS