| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2791 |
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| Symbol | |
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| ID | 4253362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3341178 |
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| End bp | 3342449 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119426 |
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| Product | HAAAP family transport protein |
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| Protein accession | YP_734919 |
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| Protein GI | 113971126 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCAA CCATAACGGC AGCACAATGG AAAGAGGATA CCCGCTTCGA CAGTACGGAT
TGGGGCTGGA TCATTATGAG TATTGGCATG GCGATTGGCG CCGGGATCGT ATTTTTGCCA
GTGCAGGTGG GGTTGATGGG CTTGTGGGTA TTCTTGCTTT CAAGCGTGAT TGGTTATCCT
GCCATGTATT TGTTTCAACG CTTGTTTATT AATACCTTGG CCGAGTCACC CGAGTGTAAG
GATTATCCGA GTGTGATTTC GGGATATCTG GGCAAAAACT GGGGCATCTT ACTCGGCGGC
TTATATTTCA TTATGTTGGT GATTTGGGTG TTTGTGTATT CCACGGCTAT CACCAATGAT
AGTGCCTCCT TTTTACAAAG CTTTGGCGCG ACCACATCAT TGTTGTCTGA AAATCCCTTC
TATGGCTTAG CATTGATCTG TGGCTTAGTC GCATTGGCCT CCCGTGGTGA AAACCTGTTA
TTTAAGATCT CCACCTTTAT GGTGCTGACT AAGCTTGGGG TAGTGGCGGT ACTCGGGCTG
ATGATGGTCG ATAAGTGGGA TATCAATAAT ATCGGTAGCG TACCCAGCAC GGGCGATTGG
CTAAAGGATG CGATTGTGAT GTTGCCTTTT ACGCTCACAT CTATTCTATT TATCCAAAGT
TTAAGCCCTA TGGTGATCTC TTACCGCTCG CGGGAAAAAT CCCTTGCCGT TGCCCGCTTT
AAGGCGATGC GTGCGATGAA CATTGCCTTT GGGGTGTTGT TTGTGGTGGT GTTTTTCTAC
GCTGTGTCTT TTACCCTCGC CATGGGGCAT GAGCAGGCGG TGCGCGCTTC CCATGAAAAT
ATCTCTGCTT TAGCCATGGT GGCCCAGGGC ATGCCAGGAC AAACCTTAAA ACTGCTTAGT
CTGACCTTAA ATATCTTTGC GGTGATGACG GCGTATTTTG GTGTGTATTT AGGGTTTAGA
GAGGCGTGTC AGGGATTGAC CATGAATATG CTGCGCCGGG TGATGCCAGA GGAGCGGATC
AATAAGTCGT TAGTGGGTTA CGGCATCATG ATCTTTACCA TTTTGCTGTC GTGGGGCGCG
ATTGTATTAA ATGCCCCTGT GCTGAGTTTT ACCTCTATCT GCAGTCCAAT CTTTGGTTTA
GTGGGATGCT TGATCCCTGC CTATTTGGTC TATCGAGTGC CTGCGCTGCA CAAATATAAA
GGGGTGTCGC TGTATATCAT TATCATCACT GGCTTACTGT TATGCATCTC TCCTCTGCTT
GCCTTTAGTT AG
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| Protein sequence | MDATITAAQW KEDTRFDSTD WGWIIMSIGM AIGAGIVFLP VQVGLMGLWV FLLSSVIGYP
AMYLFQRLFI NTLAESPECK DYPSVISGYL GKNWGILLGG LYFIMLVIWV FVYSTAITND
SASFLQSFGA TTSLLSENPF YGLALICGLV ALASRGENLL FKISTFMVLT KLGVVAVLGL
MMVDKWDINN IGSVPSTGDW LKDAIVMLPF TLTSILFIQS LSPMVISYRS REKSLAVARF
KAMRAMNIAF GVLFVVVFFY AVSFTLAMGH EQAVRASHEN ISALAMVAQG MPGQTLKLLS
LTLNIFAVMT AYFGVYLGFR EACQGLTMNM LRRVMPEERI NKSLVGYGIM IFTILLSWGA
IVLNAPVLSF TSICSPIFGL VGCLIPAYLV YRVPALHKYK GVSLYIIIIT GLLLCISPLL
AFS
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