| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2776 |
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| Symbol | smpB |
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| ID | 4253347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3322658 |
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| End bp | 3323149 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119411 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_734904 |
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| Protein GI | 113971111 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.336371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGA AAAACTCAAA AAAAGCCGCG CCTGCGACGA TCGCACGCAA TAAGCGCGCA
ACCTTCGAAT ACCGTTTCGA AGAAAAAATG GAAGCTGGCA TTTCCCTCAT GGGATGGGAA
GTGAAGTCTA TCCGCATGGG TAAAGTAAAC CTATCGGACT GCTACGTCTT CTTAAAAAAT
GGCGAAGCCT TTATGCACGG CTGTACCATT ATTCCGCTTA ATACCGCATC GACCCATGTG
GTGTGCGACC CGATTCGACT GAAGAAATTG CTCTTAAGTC GTAAAGAGTT AGATAAATTA
GCTGGTCTTG TTGAGCGCCA AGGCTACTCG ATTATCCCTA TCTCCATGTA CTGGCGTAAA
GGGGCTTGGG TCAAAGTAGA AATCGGCCTA GGTAAAGGTA AAAAAGACCA CGACAAGCGT
GAAGATACCA AAGCACGCGA GTGGGAAGTG GAAAAAGCCC GCGTAATGAA AAAGGAAAAA
ACGCGCGGAT AA
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| Protein sequence | MVKKNSKKAA PATIARNKRA TFEYRFEEKM EAGISLMGWE VKSIRMGKVN LSDCYVFLKN
GEAFMHGCTI IPLNTASTHV VCDPIRLKKL LLSRKELDKL AGLVERQGYS IIPISMYWRK
GAWVKVEIGL GKGKKDHDKR EDTKAREWEV EKARVMKKEK TRG
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