Gene Shewmr4_2775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2775 
Symbol 
ID4253346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3321967 
End bp3322404 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID638119410 
Productcyclase/dehydrase 
Protein accessionYP_734903 
Protein GI113971110 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0618615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAA TTTCTCGAAG TGTGTTAGTT CGTTTTAGTG CGATGCAAAT GTATGATTTA 
GTCAATGATG TTGAGTCGTA CAAAGAGTTT TTACCCGGTT GTGTTGGCGG TAAAGTGCTT
GAGTTTGATG GTAAAACCAT GGTGGCCTCG GTCGATGTGA GTAAGGCGGG TATCCGTAAG
ACCTTCACTA CGCGCAATCA GGTGGTGCCG GGAAAGAGTA TCGAGTTAAG ACTTGAAAAT
GGGCCTTTTA AACACTTATT CGGTCAGTGG CGTTTTACCG AGTTGACGGA AGATGCCTGT
AAGGTGGAGT TTGACTTAAA TTTCGAGTTT TCCAGCTCAT TGGTCGATAT GGCTTTTGGT
AAAGTGTTTA ATGATCTTAT GGTGTCTATG GTGACGGCAT TTACCAGCCG CGCTAAGGTA
ATTTACAGTG ACAAATGA
 
Protein sequence
MPQISRSVLV RFSAMQMYDL VNDVESYKEF LPGCVGGKVL EFDGKTMVAS VDVSKAGIRK 
TFTTRNQVVP GKSIELRLEN GPFKHLFGQW RFTELTEDAC KVEFDLNFEF SSSLVDMAFG
KVFNDLMVSM VTAFTSRAKV IYSDK