Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2773 |
Symbol | |
ID | 4253344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3321041 |
End bp | 3321565 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119408 |
Product | SmpA/OmlA domain-containing protein |
Protein accession | YP_734901 |
Protein GI | 113971108 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2913] Small protein A (tmRNA-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.664934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.104565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCA GATTTTCAGA AGTAGCGCAT ACAATGATCA ATAAAAAGCA AAGTCTTACC CTGCTGAGCG CCATTGCGCT CTCAGTTTCG CTCAGTGCCT GTAGCGTGTT TGATTGGCTG ATCTATAAGC CCGATATTCC GCAAGGCAAC TACATGGAGC CGCAACAGGT TGAAAAGTTG CGTATCGACA TGACCAAAGA GCAGGCCGAA TACATTCTTG GTCGCCCAGT ATTGCGTGAC AGCTTTGCCG ATGACACTTG GTATTATGTG TACCACTATA AGAGTGGCCG TGATGCGAGC ATTACCCACA AAGAACTGAT CCTGCACTTT ACTGGTAACA AATTAAGCTT AGTGAAGGGC GATTATGAAT TAAGCCCAGA GTTTAATACG CCGCTTGAGC AGAGTAAGTT ACCTATGACC AACACTGCTG AGTCTGCCCC GCTTGTGCCA GCACAGCGTC CAGATGAAAA GCCATTAGTG AAAGAAAATC AAACAGAAGC GCAAGTTCAA AAACCAATCA AGTAA
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Protein sequence | MAARFSEVAH TMINKKQSLT LLSAIALSVS LSACSVFDWL IYKPDIPQGN YMEPQQVEKL RIDMTKEQAE YILGRPVLRD SFADDTWYYV YHYKSGRDAS ITHKELILHF TGNKLSLVKG DYELSPEFNT PLEQSKLPMT NTAESAPLVP AQRPDEKPLV KENQTEAQVQ KPIK
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