| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2743 |
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| Symbol | |
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| ID | 4253314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3275708 |
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| End bp | 3276802 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119378 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_734871 |
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| Protein GI | 113971078 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA GTACTCCAAC GCCAGGAAAG GCCAGTAAAT ATGCCACCCT TGGTCTTCTG
ACAAGCATAG TAATCTTATT GATCTGGTAT CTTTTGGCCG ACAGAATGAC CCCCTATAGC
TCGCAGGCTA GGGTTCAAGC TTTTGTGGTG CCGATTGCGA CTGAAGTCAC AGGGCAGATC
TTGAAAGTGT ATGTACAAGA TAATCAGGAT GTTGCCGAGG GCGATCCCTT ATTTGATATC
GATCCTGAAC CCTATGATAT TGCGCTTGCT AAGGCAAAAT CTGACTATGA GACAGTGCTA
AATAGCGTTA AAGCCAATAA CGAAGGTGTG AAAGCGGCAG AAGCAAAATT ACAAGCCATG
CGAGCCTCTT ACAGTAATGC CGTTAAAGAT GCAGAGCGGC AGGAGCGCCT CTATCGCCAA
GACCCTGGCG CCATTTCGGT ACGCCGACTC GAAATAGCAC AGGCATCGCG AGAAACCGCC
AGTAGCCAAG TTTCGGCAGC CGAAGCCGAT GTCAGGCGTG CCATTGAGGC CGCGGGGGTC
AATGGCGAAA ACAACTCTCA ACTATTAAGT GCCCGCTCGG CGGTGCACAA AGCCGAGCGC
GATAGGCAAA ATACCCATGT TGTCGCACCA AGTCGCGGCG TGATCACAGA CTTAAATACC
GATGTGGGGC AATTTATCAA CGCTGGCGCG CCCGCAATGA CCCTCATTGC CATTCACGAT
GTGTGGATTT CAGCAGAGTT AACCGAAAAC AACCTAGGGA ATATTCAAGT GGGTGACAGC
GTCGCTATCT TGCTCGACAG CAGACCAGGA CAGCTGTTTC GCGGACAAAT ACGCAGTATC
GGCTATGGGG TAGACGATGG TAAAAAGCAG GCGGTGGGTT CACTGCCAAC GGTCAGCAAT
AGCCGCGATT GGCTCAGGCA AGCACAACGA TTCCCGGTAA AAGTGTCGTT CTCATCGGAT
GATATGCCGC CAGCGGCGAG CTTACGGGTT GGAGGTCAGG CGGATATTTT GGTGTATACC
GAAGAACATA GCCTGATGAA CCCACTCGGC GCCCTCTATA TCCGGATCAT GAGTCTCTTC
TCATACCTGT ATTGA
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| Protein sequence | MTDSTPTPGK ASKYATLGLL TSIVILLIWY LLADRMTPYS SQARVQAFVV PIATEVTGQI
LKVYVQDNQD VAEGDPLFDI DPEPYDIALA KAKSDYETVL NSVKANNEGV KAAEAKLQAM
RASYSNAVKD AERQERLYRQ DPGAISVRRL EIAQASRETA SSQVSAAEAD VRRAIEAAGV
NGENNSQLLS ARSAVHKAER DRQNTHVVAP SRGVITDLNT DVGQFINAGA PAMTLIAIHD
VWISAELTEN NLGNIQVGDS VAILLDSRPG QLFRGQIRSI GYGVDDGKKQ AVGSLPTVSN
SRDWLRQAQR FPVKVSFSSD DMPPAASLRV GGQADILVYT EEHSLMNPLG ALYIRIMSLF
SYLY
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