Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2643 |
Symbol | |
ID | 4253214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3147672 |
End bp | 3150257 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638119278 |
Product | PII uridylyl-transferase |
Protein accession | YP_734771 |
Protein GI | 113970978 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.843339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.359945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAG CTCTGCTAGC TAAACAATCA TTAATCGAAC AGAATCAAAC GCTTTTAGCA AGATTCAAGG CCAAAACCCC GATTGAAGAG CTAGTGACGC AGCGCTGTCA GTTCGTCGAT TCCCTCGTCA AACAGGCCTG GCAACAGCAC GGTCTGGACC AATATCCTAT CGCCCTGATA GCCGTTGGCG GCTATGGTCG CGGCGAGTTA CATCCGCACT CGGATGTCGA TTTATTATTC CTGTTCGAAG GTGAGTTATC GCAGGCGGCT GAAACCGCAC TGAGCGAATT TATCGCCTTT TTATGGGACG CCAGCCTTGA AATTGGCCAC AGTGTTCGCA CCCTCAGCGA TACCTTAAAT CTGGGTCGAG AAGACATTAC CATCGCCACT AACCTGCTCG AGGCTCGGCT ACTCTCAGGC CCAGAATCCC TGTTTGATCA ACTCTATGAC GCCATCCGCC AGAGCGACTT TTGGACGTCG AGCCAGTTCT TTATCGCCAA ACGAGATGAA CAAACGGCCC GCCATGCCAA GGCGAGCGCC TTCGATCTTG AGCCCAACAT CAAAAGCTGC CCCGGCGGCC TGCGGGACAT TCAAACCATC GCCTGGGTTG CCATGCGCCA CTTTGGCGCC TCACGCCTAG AAGAACTGGT TCAATACGAA TTTTTAGAAC CCGCCGAGTT AGAAGAGCTG CTCGAGTGTC AGCATTTTCT GTGGAAGCTG CGCTTTGCCC TGCATATGGC GGTCGGGCGC GATGAAAATC GCCTACTGTT CGATGTTCAG CGCCAAGTGG CCGAGCTGAT GGGTTATGAA GACGCCACTC AACTTGCCGT TGAGCAGATG ATGAAACGCT ACTATCGCAC GGTGCGACGG GTGATGGAGC TGAACGAAAT GCTGCTGCAA CTGTTTAAGC GGGCGACTCT TGGCCAAACC AAGGCCTTAG AAATTCAAGC GATTGACAAT AACTATCAAC GCCGCGGTGC CTTTATCGAG GTCCTAAGGG ACGATTTATT CGATAGTGGC GAAGAAATTG TACGCCTCTT TGTCCATGTC GCTAAAAACT CCAATATTAA AGGCATTTAT GCGCCGACAC TGAGGTCGCT AAGGCGCGCA CGCCGGGCGC AGCTGCAACC CTTGCAGGAA AATCCGCAGT GCCGCCAAGC CTTTATGGAA ATATTAAAGC ATCCTCGTGG CATCGCGGCC TTATCGCTGA TGCATAAACA CGGGGTGCTG TCGGCCTATT TGCCCGCATG GCGCAATATT GAAGGCCAAA TGCAATTTGA CCTGTTCCAT GCCTATACGG TGGATGAACA CACCCACAGA TTGCTGCTCA ACATCGAGCG CTTCTCACAG CCGGAGCAGA AGGAAGAGTT TCCTTTAGGC TCAGTGCTGA TCAATCAGTT ACCGAAAAAA GGTTTGTTGG TACTTGGCGC AATTTTCCAT GATATCGCCA AGGGACGCGG CGGCGATCAC AGCAAGCTTG GCTCAAGCGA TGCCCTCGCC TTCTGTAAGC TCCATGGCTT AAACGACCAC GATGGCCGCT TAGTCGCTTG GCTGGTCGAA AATCACTTAG TGATGTCGGT AACCGCTCAG CGCCGCGATA TTTCCGATCC CGATGTGGTG GCCGACTTTG CCAGCAAAGT GCGCGATGCG GTGCATTTAA GTTATTTATA TTGCTTAACC GTCGCCGATA TCTGCGCCAC CAACGAGAAG ACCTGGAACA ACTGGAAAGG CTCACTGCTG CGTGACTTAT ATTTTTCCAC CCAAAGGGTG CTGGCACGGG GGAAAGAAAA ACCCGTCGAT ATCCGCGCGC GGGTACGGGA ATATCAAGCC AAGGCCAAGA AAGACCTGCT TCGCCGTGGC GTGAAAGAAA AAGATTTAGA TACCCTCTGG CAACGCTTTA AGGCCGACTA CTTTTTGCGC CACCAGCCAA ATCAGGTTGC TTGGCATGCC GAAGCTATCC TTAAGCATAA ACAGTTGGAT GAGCCGCTGG TGCTGGTGTC CAAACACACG ACACGCGGCG GCACTGAACT TTTTGTCTAC TGTCAGGACA GGCCTAAGCT GTTCGCTACC GTGATGGCGG TGCTCGATAA TAAAAACATC AACGTCCACG ACGCTAACAT TATGACGTCG AAGGATAATT ACGCTCTAGA CACCTTCGTT ATCCTCGAGC AAGACGGCGC CCCCGTGAGC CAACTCTCAC GCATTCAAAG TATCCGTAAG GCCCTTGAAA AGGCGCTTGC AAGCGATAAC CCTAAGCTGC CGCGCTTTAG AAAGCTGTCA CGCAAGATGA AACCTTTTAA TGTTCCCACT CAGGTGAGTT TCCTTGAGAG TAACCGTCAT GGTACAAGTA TGATGGAACT CATCGCCTTG GATACGCCGG GATTATTAGC TAAAGTGGGC GATATTTTTT ATCGCTGCAA CACGACCTTG CTGGCCGCCA AAATCACCAC CATTGGCGAG CGAGCCGAAG ACTTTTTTAT TTTGCAAACC AATGATGGCT TGCAACTCAA TGAAACCCAA GAGAACACGC TCAAGGAAGC CTTGATTAGC GCGCTGAGCG CCATCAACAC AGAGTCAACC AATTAA
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Protein sequence | MNTALLAKQS LIEQNQTLLA RFKAKTPIEE LVTQRCQFVD SLVKQAWQQH GLDQYPIALI AVGGYGRGEL HPHSDVDLLF LFEGELSQAA ETALSEFIAF LWDASLEIGH SVRTLSDTLN LGREDITIAT NLLEARLLSG PESLFDQLYD AIRQSDFWTS SQFFIAKRDE QTARHAKASA FDLEPNIKSC PGGLRDIQTI AWVAMRHFGA SRLEELVQYE FLEPAELEEL LECQHFLWKL RFALHMAVGR DENRLLFDVQ RQVAELMGYE DATQLAVEQM MKRYYRTVRR VMELNEMLLQ LFKRATLGQT KALEIQAIDN NYQRRGAFIE VLRDDLFDSG EEIVRLFVHV AKNSNIKGIY APTLRSLRRA RRAQLQPLQE NPQCRQAFME ILKHPRGIAA LSLMHKHGVL SAYLPAWRNI EGQMQFDLFH AYTVDEHTHR LLLNIERFSQ PEQKEEFPLG SVLINQLPKK GLLVLGAIFH DIAKGRGGDH SKLGSSDALA FCKLHGLNDH DGRLVAWLVE NHLVMSVTAQ RRDISDPDVV ADFASKVRDA VHLSYLYCLT VADICATNEK TWNNWKGSLL RDLYFSTQRV LARGKEKPVD IRARVREYQA KAKKDLLRRG VKEKDLDTLW QRFKADYFLR HQPNQVAWHA EAILKHKQLD EPLVLVSKHT TRGGTELFVY CQDRPKLFAT VMAVLDNKNI NVHDANIMTS KDNYALDTFV ILEQDGAPVS QLSRIQSIRK ALEKALASDN PKLPRFRKLS RKMKPFNVPT QVSFLESNRH GTSMMELIAL DTPGLLAKVG DIFYRCNTTL LAAKITTIGE RAEDFFILQT NDGLQLNETQ ENTLKEALIS ALSAINTEST N
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