| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2612 |
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| Symbol | |
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| ID | 4253183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3107715 |
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| End bp | 3108767 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119247 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_734740 |
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| Protein GI | 113970947 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.13871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000334013 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGCCTTG GCGGAACAAT ACAACATGGC CATTGCAGAC AAAGACTCAT CCCAAGGCGA
GACCAAATGA GCAACCCATT ACTAAAACAA ATCTGCGAAC TGGATGTCTT CACCTTATTG
GTATTTAAAA GTATTTTTGA TAACGGACAT GCCAATAGTG CCGCCAAGGC GCTCAATGTA
TCTGCGCCTA AAATTAGCCG CTGTCTTAAC GCGCTTCGCT TGACCTTTAA CGATGAACTG
TTTTATCGAC GCCAGCAGGG GTTAAAACCC ACTCCCCTCG CGGAAAGCTT ATATGTCGCC
ATTTGCCAGT TTACCGATTC AGTGTATTAC TTAGAGCAAT CGGCACTGCA AATTCAAAAT
GCGGCAAGCC ATGTCGAGCG TCCGCTACAT ATCGCCGCGA GTAATGGATT ATTAAGCTTT
TTAGCCCCCC AACTCTGTAC ACCCGAAGCA ATTAGCGAAC TCGGCCAAGT CAGGTTACAC
AAATGGCAGG AAAACACTCC TGAATTAATC CACGCAGGGG AATTAGACTT TGGGATCACC
ATAGAGCCGA CAGATACGAA AGACTTGAAT GTCTCCCGCT TAGGTTGTAT TTCCAATGTG
TATGTAGTGG CCTCCAGACT ACATCCCCTT TGGGAAAGCC TGCAAGAAAT CAGCTTAGAG
CAAATCTGTC GTCATTCCTT TTTGTGCCTC GAGCTAAAAG GCTTTAATAG CCGTATTGAT
CCGCTAGAAC TATTTTGCCA ACGCCAAGGG CTGCTGCTGC CATCGATTGA AAGGGTGATC
GATCGAGAAG AATGGTATGC CCACTTGCTG ACCATGCAGA GCGTCGCCTT CTGCTCGAGT
ATCGATATGC ATACGGTCAA GCATATGCCG GGGTTAAAAT TGGCGCCGCT TCCGGTATCG
GAGCAACACC GTCTTCATGA GACTATTATG CCACCGCAGT ATTTTCTCGT TGAAAAGCCA
CGAAGCCACA GGCGCTATAG CCAAAACCAG TGCGAACTTG TAGTCAGCTC ATTGTTAACA
GCCCTAACAA CCAACACTCG TGTCACTCAA TAG
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| Protein sequence | MCLGGTIQHG HCRQRLIPRR DQMSNPLLKQ ICELDVFTLL VFKSIFDNGH ANSAAKALNV
SAPKISRCLN ALRLTFNDEL FYRRQQGLKP TPLAESLYVA ICQFTDSVYY LEQSALQIQN
AASHVERPLH IAASNGLLSF LAPQLCTPEA ISELGQVRLH KWQENTPELI HAGELDFGIT
IEPTDTKDLN VSRLGCISNV YVVASRLHPL WESLQEISLE QICRHSFLCL ELKGFNSRID
PLELFCQRQG LLLPSIERVI DREEWYAHLL TMQSVAFCSS IDMHTVKHMP GLKLAPLPVS
EQHRLHETIM PPQYFLVEKP RSHRRYSQNQ CELVVSSLLT ALTTNTRVTQ
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