Gene Shewmr4_2603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2603 
Symbol 
ID4253174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3099026 
End bp3099676 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID638119238 
Productmaleylacetoacetate isomerase 
Protein accessionYP_734731 
Protein GI113970938 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00128828 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000038371 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTAT ACGGTTATTG GCGCTCTAGC GCCGCCTATC GTGTGCGTAT TGCCCTCAAT 
CTTAAAGGCG TGAGCGCCGA GCAGCTGTCG GTGCATTTAG TGCGTGATGG TGGCGAGCAG
CACAAGGCGG ATTATATCGC CCTAAACCCG CAGGAGCTGG TGCCGACCTT AGTGGTCGAT
GATGAGCAGG ATGGTGATGC CTTATCTCAA TCCCTCGCCA TTATCGAGTA TCTGGACGAG
CTTCATCCAA AGACGCCGCT ACTGCCTGCA TCGGCGCTTG AACGTGCCCA TGTGCGTGCC
ATGGCATTAA CCATCGCCTG TGAAATTCAT CCACTCAATA ACCTGCGGGT ATTGCAGTAT
TTAACTCAGA AGCTGAACGT CGCCGAAGAA GCTAAAACCG CTTGGTATCA CCATTGGGTG
GCGAGTGGGT TTGCGGCGCT AGAAACCCAA CTTGCGCGCC ATAGTGGCCG TTATTGTTTT
GGTGACAAAG TGACGCTGGC GGATCTGTGT TTAGTGCCGC AGGTTTACAA CGCCCAGCGT
TTTAATGTGG ATTTAACGCC GTACCCCAAT ATCATGCGGG TATGGGCTGA GTGTAATCTG
TTGCCAGCCT TTGCGGATGC GGCACCAGAG CGCCAAGCCG ACGCGGTTTA A
 
Protein sequence
MKLYGYWRSS AAYRVRIALN LKGVSAEQLS VHLVRDGGEQ HKADYIALNP QELVPTLVVD 
DEQDGDALSQ SLAIIEYLDE LHPKTPLLPA SALERAHVRA MALTIACEIH PLNNLRVLQY
LTQKLNVAEE AKTAWYHHWV ASGFAALETQ LARHSGRYCF GDKVTLADLC LVPQVYNAQR
FNVDLTPYPN IMRVWAECNL LPAFADAAPE RQADAV