| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2593 |
|---|
| Symbol | |
|---|
| ID | 4253164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3088067 |
|---|
| End bp | 3089215 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638119228 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_734721 |
|---|
| Protein GI | 113970928 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000406118 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATT TAGTAGATAA GGCTGCACAC ACGTCCACCA CACAAAATGT TGTTTTTCAA
ACCTTAGCCA CCGCCTCGGG TAAATTAGTT GGGGTGGTGA CGCTCAATGT TGAAAAAGCT
CTCAACGCCT TGGATCTCGA TATGGTTCGA GCCATGACGG TGCAGCTCAA TTTGTGGAAA
AAAGATCCGT TAATCGCCTG TGTGGTACTC GATGGCAGCG GAGAAAAGGC GTTCTGTGCG
GGTGGCGATG TGCGCGCGTT ATATCACGCG TCTGTTGCTG CTAAGGGACA AGTGACTGAG
GTCGCTAAAG TATTCTTCGA AGAAGAATAT CGTCTCGATT ATCTACTGCA TACCTATGGC
AAACCTGTGC TGGTATGGGG TGATGGCATA GTGATGGGCG GCGGTCTGGG CCTGATGGCG
GGCGCGAGTC ATAGAGTCGT GACTGAAACC TCCCGTATCG CTATGCCCGA AGTCACCATT
GGGCTTTATC CCGATGTGGG CGGCAGCTAT TTCCTCAACC GTATGCCGGG CAAAATGGGG
CTGTTTTTAG GGCTAACGGC CTATCAAATG AACGCCGCCG ATGCCTGTTA CGTTGGCCTT
GCCGATCATT ATCTGAATCG TGACGATAAA GAGCTGATGT TCGATGCCAT GGCGACCCTC
GATTGGAGCG ATACGCCAGC GCTGAATCAT CAAAGACTCG ACTCGATGAT CAACGAACTG
TCGAACCAAG TGGACATCCC TAAGGGCGAT AGTTTACTGG CCGAGAGCCA AGAGATGATC
GACCGACTGA TGGCAGGCAG CTTGACGGAT ATCGTCAGCC GGATGTCAAC CTTAAGCACC
GAAGAAGCCT GGTTAAATAA AGCCTGCACG ACCATGTTGG CGGGCAGTCC TATCAGTTGG
CATTTGGCGT ATATCCAAAC CCAACTCGGC ACCAAACTCA GCCTCGCACA ATGTTTTAAA
TGGGAATTAA CCGTCAGCGT TAATGTTTGC GCCAAAGGCG ATTTCTGCGA AGGGGTGCGT
GCACTCTTGA TTGACAAAGA CAGACAGCCA AAGTGGCAGT TTGCCGATGT GCAATCCGTG
CCAAACAGCG TTATCGAGGA CATATTGACC TCACCTTGGG GAGATCATCC CTTAAGCCAA
TTAAGCTAA
|
|---|
| Protein sequence | MTNLVDKAAH TSTTQNVVFQ TLATASGKLV GVVTLNVEKA LNALDLDMVR AMTVQLNLWK
KDPLIACVVL DGSGEKAFCA GGDVRALYHA SVAAKGQVTE VAKVFFEEEY RLDYLLHTYG
KPVLVWGDGI VMGGGLGLMA GASHRVVTET SRIAMPEVTI GLYPDVGGSY FLNRMPGKMG
LFLGLTAYQM NAADACYVGL ADHYLNRDDK ELMFDAMATL DWSDTPALNH QRLDSMINEL
SNQVDIPKGD SLLAESQEMI DRLMAGSLTD IVSRMSTLST EEAWLNKACT TMLAGSPISW
HLAYIQTQLG TKLSLAQCFK WELTVSVNVC AKGDFCEGVR ALLIDKDRQP KWQFADVQSV
PNSVIEDILT SPWGDHPLSQ LS
|
|---|
| |