Gene Shewmr4_2579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2579 
Symbol 
ID4253150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3067585 
End bp3068913 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content55% 
IMG OID638119214 
Producthypothetical protein 
Protein accessionYP_734707 
Protein GI113970914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTT TTACACTCCG CACCTTAAGC AAAATGGTCA GCCTCGTTAT CTTAGGTAGC 
CTGCTCGGTG CCTGTCAGGA TGAGGCGCCC GCGCCAGAGC CACAAAAAGA AGCCAGCCCA
ATGTATGCCA AGGGCTTAAC CTTAGCCGCG CCGACACAGA GCGACCTTGT CGATACTAAT
ATCGCCTCGC CAACCCTCGC GCCGATTAAT ACCAGTACCG ATTACGTCAG CTTTATCACC
CCGCTCTACG GCGAATACCA AGCCAGTCAG CCCATGCTTG AGCAGGCAAG CCAGAGTGAT
GAGTATTGGC TTAATGTCAC CGGCGCCGAT CTAAATGCTG GCGTGCAGCT CAATTTGAGC
CAAGCGGGCA GCTTAGTGCG GATTGCGCCC CGCGGCGATG TCAGCACAGG CGCCTTAATG
CATGCCGATG TCGTTTCCCC CGAGCGGGTG CAAATTAAGC GGATAGGCCA AACGCCGCAG
GGGAAAAACG CCAGCCCACA AGCCACGGAA TCCTTGGTTA AATCGCTGGT GAGCGCCGAC
GCCTTAGCCA GCGCAGGCTT AGCCGATGAC TCCAGTGCCC TGCAAATGTC TGAAAAGGCC
ACGGCCGGAG AATATCGCCT GCAAGTCAGC CAGCCCTTAG TCGCTAAGGC CAACTATCTG
GTCAACGTGA AGGAAAAAGG TTCGCCCTAT CAACTGAGTA TCAAGGCGCC CGGCGCAATT
GCGGCCGATG CCCAAACGGT TGGGGTAAAA CTCGCCTTAA GCCAAAGCGA TAATCAATTT
GCGCCTCAAG CCAAACTCAA GCAAGCCGAT GGCACAGAGC AAGCGCTGGC CATGGTGAAA
CAGGGGGATG AATGGCAGGC TTTAGTGCCC GCAGACTTAC CCCTTGCCAG CAGCAATGCG
GGGCTGAGTG AAATCGAAGT CACAGTCCAG ACTCAGGTCG ATGGCCGCCC AGTACAGCGC
ACGGTGAAAA CCGCGTTTAA GTCCTATGTA AACTCGGCCA GCATCAAACC CGAAGTGCTA
ACCGTTTGGG ATAAAGGCGT ACCGAATCAA GTCAACTTTG AGCTCGATAT CGCTGAAGCG
GGACGCTTTG GTTTGAGTGG CGTGCTAACG GGCACCAATG CCGAGGGTCA AAAAGTGGCG
ATTATGCGCA CCCAAGCGGC GACTTGGTTA ACGCCCGAAT CCCCCAAACT CAAGCTGATG
TTTGACCCAA CGCTCATCCA AGCATCGGGC CTGCAACCGC CCTTTGAACT CAACGAGCTA
GAGCTGCAAG ACCAAGGGCA AATGGCGCGA TTAAGTTTTC AGGCCAACGC ACTGGTGCTT
ACTCGCTAA
 
Protein sequence
MQPFTLRTLS KMVSLVILGS LLGACQDEAP APEPQKEASP MYAKGLTLAA PTQSDLVDTN 
IASPTLAPIN TSTDYVSFIT PLYGEYQASQ PMLEQASQSD EYWLNVTGAD LNAGVQLNLS
QAGSLVRIAP RGDVSTGALM HADVVSPERV QIKRIGQTPQ GKNASPQATE SLVKSLVSAD
ALASAGLADD SSALQMSEKA TAGEYRLQVS QPLVAKANYL VNVKEKGSPY QLSIKAPGAI
AADAQTVGVK LALSQSDNQF APQAKLKQAD GTEQALAMVK QGDEWQALVP ADLPLASSNA
GLSEIEVTVQ TQVDGRPVQR TVKTAFKSYV NSASIKPEVL TVWDKGVPNQ VNFELDIAEA
GRFGLSGVLT GTNAEGQKVA IMRTQAATWL TPESPKLKLM FDPTLIQASG LQPPFELNEL
ELQDQGQMAR LSFQANALVL TR