| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2575 |
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| Symbol | |
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| ID | 4253146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3063931 |
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| End bp | 3064944 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638119210 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_734703 |
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| Protein GI | 113970910 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTAA CCAATAGGTT AACAGTTAGG TCAGTTAAGA CGCGGCAACC TTCTTCCCGA
GGATGGGGCA AGCTGCTGGC GAGTCTATTG GGCGCGGCGC TGTTACTGCA ATTGACGGCC
TGCGGCGATG AATCGCCCCG CGTGCTGGGC ACCGTCGAGC GTGACAGGTT AACCCTCACC
GCGCCTGTGG GGGAGCTGAT TAATCGAATT AATGTAGTTG AAGGCCAGCA AGTGCAGGCG
GGAGAAGTAT TACTCGAGCT GGATAGTACA GCCGCTCAGG CGCGCCTTGG CCAGCGTCAG
GCCGAGCTTA AACAGGCGCA GGCCAAGCTG GAGGAAGCCG TGACGGGGGC TCGCTCGGAA
GACATAGATA AAGCCCGCGC GGCCCTTGAT GGCGCCAATG CCAGCGTGAA AGAGGCGCGG
CAGAATTTTG AGCGTACGCA ACAGCTATTT AAGACTAAGG TGCTCAGCCA AGCGGACTTA
GATGCGGCGC GCGCAGCGCG TGATACCAGC CTTGCCAAGC AGGCCGAAGC CGAGCAGAGC
CTAAGACTGC TGCAAAACGG TACCCGTAGT GAGCAACTCG AGCAAGCCAG AGCCGCAGTC
GAGGCGGCCA TGGCTGGCGT GGCGCAGGAG CAAAAAGCTC TCAAGGATTT AAGCCTAGTA
GCGGCGAAAC CCGCAGTGGT GGATACCTTA CCTTGGCGGG TGGGCGACAG GGTGGCCGCA
GGTAGTCAAC TCATTGGTTT ATTGGCAATT GAGCATCCCT ATGTGCGGGT ATATCTGCCA
GCAACTTGGC TCGATAGGGT CAAGGCGGGG AACCAAGTGA AGATCCTTGT CGATGGCCGC
ACCCAGCCTA TTGCAGGCAC TGTGCGTAAT ATTCGCAGTC AACCGGCTTA CACCCCTTTT
TATGCGTTAA ATGAACGTGA TAGGGCACGA CTGATGTATC TCACCGATAT CGATATTGCG
CCAGAGGGAG AGGATTTACC CACGGGAATG GCCCTTGAGG TACTGCTGCC ATGA
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| Protein sequence | MILTNRLTVR SVKTRQPSSR GWGKLLASLL GAALLLQLTA CGDESPRVLG TVERDRLTLT
APVGELINRI NVVEGQQVQA GEVLLELDST AAQARLGQRQ AELKQAQAKL EEAVTGARSE
DIDKARAALD GANASVKEAR QNFERTQQLF KTKVLSQADL DAARAARDTS LAKQAEAEQS
LRLLQNGTRS EQLEQARAAV EAAMAGVAQE QKALKDLSLV AAKPAVVDTL PWRVGDRVAA
GSQLIGLLAI EHPYVRVYLP ATWLDRVKAG NQVKILVDGR TQPIAGTVRN IRSQPAYTPF
YALNERDRAR LMYLTDIDIA PEGEDLPTGM ALEVLLP
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