| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2518 |
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| Symbol | |
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| ID | 4253089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2997941 |
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| End bp | 2999299 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119153 |
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| Product | gluconate transporter |
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| Protein accession | YP_734646 |
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| Protein GI | 113970853 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.76105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0441759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAG TGCTCATCCT CATTGGCGTG ATTGCATTTA TTGTTATCGC GACCTCAAAA
TTTAAGCTCC ATCCGTTTTT AACCTTAATT CTGGCCGCCT TTATCGCCGC CTTCGCCTAC
GGTTTACCGA GTGGCGATAT TGCCAAAACC ATCACCACAG GCTTTGGTAA TATCCTCGGC
TATATCGGTC TGGTGATCGT GTTAGGTACC ATTATCGGTA TCATCCTCGA AAAGAGCGGC
GCCGCCATTA CCATGGCGGA CGTGGTGATC AAAGTCTTGG GTAAACGCTT CCCAACACTC
ACTATGTCCA TCATCGGTTA TTTAGTGTCG ATTCCGGTGT TTTGTGACTC GGGTTTCGTC
ATTTTAAACT CGCTTAAACA ATCCATGGCC AACCGCATGA AGGTCTCGAG CGTGTCCATG
AGCGTGGCGT TAGCCACAGG TCTGTATGCC ACTCACACCT TTGTACCGCC AACACCAGGC
CCTATCGCCG CGGCAGGTAA CTTAGGGCTA GAGTCCAACT TAGGCCTAGT GATTGGTGTC
GGCTTATTTG TTGCTGCCGT TGCCGCACTT GCGGGGATGT TATGGGCGAA CCGTTTTGCC
AGTGTTGAAC CCGATGGCGA AGGCGCAGAA GAACTAAAAG CTCAGGCAGC TGATTTTGAA
GCCTTAAAAC AAAGCTATGG CACACTCCCT AGCCCATTAA AGGCCTTTGC ACCGATTTTT
GTGCCTATCC TGTTAATTTG CTTAGGCTCT ATCGCCAACT TCCCGTCTGC ACCACTGGGC
AAAGAAGGCC TATTCAGCCT GTTAGTCTTC CTTGGCCAAC CCGTTAACGC CCTGCTTATC
GGTCTGTTCC TGTCACTGCT GCTATTGAAA AGCGATAACA AGATTGCCGA ATTTAGCGAA
CGTATCAGCC AAGGTTTAGT TGCAGCTGCA CCGATTATTT TGATCACCGG TGCCGGTGGT
GCCTTCGGTG CAGTGTTAAA AGCCACACCT ATCGGCGACT ACCTAGGTAG CTCACTGTCG
GCGCTAGGGG TGGGTATTTT TATGCCCTTT ATCGTCGCCG CCGCACTGAA ATCGGCGCAA
GGTTCATCCA CCGTCGCCCT AGTGGCAACC TCGGCCTTAG TCGCGCCTAT GCTGGGCGAT
ATTGGTCTTG GCAGTGATAT GGGCCGAGTG TTAACCGTAA TGGCGATTGG TGCCGGCGCC
ATGACAGTCT CCCACGCCAA CGACAGCTTC TTCTGGGTCG TGACTCAATT TAGCCGCATG
AGCGTTAAAC AAGCCTATAA AGCACAAACC ATGGCGACCC TTATCCAAGG CGTTACCGCA
ATGCTGACCG TGTATGTACT AAGCTTAGTG CTGCTCTAA
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| Protein sequence | MNLVLILIGV IAFIVIATSK FKLHPFLTLI LAAFIAAFAY GLPSGDIAKT ITTGFGNILG
YIGLVIVLGT IIGIILEKSG AAITMADVVI KVLGKRFPTL TMSIIGYLVS IPVFCDSGFV
ILNSLKQSMA NRMKVSSVSM SVALATGLYA THTFVPPTPG PIAAAGNLGL ESNLGLVIGV
GLFVAAVAAL AGMLWANRFA SVEPDGEGAE ELKAQAADFE ALKQSYGTLP SPLKAFAPIF
VPILLICLGS IANFPSAPLG KEGLFSLLVF LGQPVNALLI GLFLSLLLLK SDNKIAEFSE
RISQGLVAAA PIILITGAGG AFGAVLKATP IGDYLGSSLS ALGVGIFMPF IVAAALKSAQ
GSSTVALVAT SALVAPMLGD IGLGSDMGRV LTVMAIGAGA MTVSHANDSF FWVVTQFSRM
SVKQAYKAQT MATLIQGVTA MLTVYVLSLV LL
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