| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2507 |
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| Symbol | |
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| ID | 4253078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2979785 |
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| End bp | 2981923 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119142 |
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| Product | outer membrane protein, putative |
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| Protein accession | YP_734635 |
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| Protein GI | 113970842 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0767045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000584641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAATAA TGAACATATC GACTCCTAAA GCTTGTTTCT CACTCACATT ACTGGCTTGG
GCGATTAGTG GCGTACTCAG CACAGCCCAT GCTGAAGGGT ATGAAATCCA AAAAGCAAAT
CGCAGTGGCG TAAAAAGTGA GGCATGGAGC TGTAAGCAAT GCCAGCCCAA AACAGGGCGC
CAAGGCAACG TCAGCGCCAC CCTCGCCTAC AATGACGGTG AAGATAGCCG TTTTGGTAAT
CGCACTGGCA CGGATAAAGA TGGCATGGTC GGTGCCGTGG GCGCCGATAT GCAATATCAG
GCAGAGAGTG GTTACCAAAC CCGGCTAGAA GCCGATAAAT TGGGATTTGA CACAGGTTCA
GCCAAGCTCA CCACAGGCCA ACCCGGACAC TATCAAATCC AATTGGGTTA TAAAGGTCTC
GCCAATTATC AATACAATCA GCTAAAGAGC CCTTATCTCA CCGATAACGA TAAGATGCTA
TTGCCTGATA ATTGGGTAGA GGGAGCAACG ACCCAATCCA TGCCATTACT GCAATCGAGT
TTAATCGAAC AGGACTTAAG CATTACGCGG GATAGATTCA ACCTCGGCGG TTACTATGCA
GGCCATATCT CATCGAGCAG CCGCTACAAA GCCTCGGTAA ACTATCAGCA TGAAAACCGC
AGTGGCACGA AAAAAACCAG CGCAAATATT CTCACTAACA GTGTGATGTT GGCGCAGCCA
ATCGATGACA GCACAGATGA AATCGATGCC AGAGTCTATT TTGGCGGCGC AGGCTGGCAA
GCGGGCATAA ACAGCCAGAT AAGCCAATAC AAGAATGATC ATCAGGCACT ACTATGGCAA
TCGGCCTATA CGCCCACATT TGGTGCGGCC TACTTTGGAC AAAATGCTGT CGACCCAGAT
AACAAGGCCT ATCGGATCGC AGCCGAGGCC AGTGGTGGCC AAAATGGCCA TAACATCCTT
ATGCACGCGG GTATCAGCAA AATGTCGCAG GATGAGGCTT TTCTTCCCGC GACCATTAAT
GGCCCCTCCC CTGTACTGCC AACTGATAAT CTGGATGCCC AAGTGGACAT CCTAGATATG
GTGCTTAAGT ATTCAGGACG CATCACACAG GATTTGAGTG TTCAAGCCAG TTATAACTAT
CAAGACAGGG AAAACAAAAC AGCTCAACTG GATTTCCCAC AGGTCGTGAC CGACAGCTTT
CATCAAGGCA CAGAACAAAA TCGCCTCTAC GATAAACGCA GCAAACAATT CGACCTTAAA
GGTAAATACC GTCTAACGCC TTCAGCCTAT GCTGAGGCGG GATATAGTCG TGATGAAGTT
ATCTATTCTG AACTAGACAG GCAATCCGTT GACGAATCGG GACTGTTTGC CAAACTCAGC
TACCGTTATT CGCCCGCTTG GTCAGCTTGG TTAAAAGGAG AAGCATTAGA CCGCAATGGC
AGTGAATACA ATCCTGTGAC CAGCACCCAA AGTCCGAGTA ATCCTTGGTT GCGTAAATCC
TACCTCGCGG ACAGAAAACG TCAAAAAGTC ACCCTACACA CGGATTATCA AAGTGATATA
GGTCTGTCTG TAGGGGCGAG TTTACACAGC ATCGACGATG ACTATGACCA CACATTAGTC
GGACTCACCC AAGTGTCTTA CCTCGGCTAC GACGTATCAG CACAGTATCT GATTAGCGAC
AACCTAAGTT TTAATGCTTA TCTCAACCAA GACTGGCGCG ATTCAGACCA AGCGGGAAGC
AATCGTTTCT CAACGCCGGA TTGGTATAGC ACATCGGAAG AAAAATCGAC CCTGATTGGT
GCAGGCCTCG CATATCAAAA TCTGCTGGAT AATCGCTTAG ATCTTGGTTT GGACTACAGC
TACTCCGATG GTCAAAGTGA TACCGAAGTC ACCTACGGTA TTAACAGTCC CTACGGTGAC
TATTACAGTC GCAAGCACAA TATTAACGCC TACGCCAAAT ATAAGCTGGC CGACAGTATG
TCGTTACGCT TCGATTGGTT GTTCGAGAAA TATCAAGATG CAAACTGGCA AAACCAAAAC
ACCACTTGGG ACACTGTCCC CAACGTGCTC AGTTTTGGCG ATATCAGCCA CGACTACAAT
GCTCATTACT TAGGTTTGAC CTTAAGCTAC CAAATGTAA
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| Protein sequence | MQIMNISTPK ACFSLTLLAW AISGVLSTAH AEGYEIQKAN RSGVKSEAWS CKQCQPKTGR
QGNVSATLAY NDGEDSRFGN RTGTDKDGMV GAVGADMQYQ AESGYQTRLE ADKLGFDTGS
AKLTTGQPGH YQIQLGYKGL ANYQYNQLKS PYLTDNDKML LPDNWVEGAT TQSMPLLQSS
LIEQDLSITR DRFNLGGYYA GHISSSSRYK ASVNYQHENR SGTKKTSANI LTNSVMLAQP
IDDSTDEIDA RVYFGGAGWQ AGINSQISQY KNDHQALLWQ SAYTPTFGAA YFGQNAVDPD
NKAYRIAAEA SGGQNGHNIL MHAGISKMSQ DEAFLPATIN GPSPVLPTDN LDAQVDILDM
VLKYSGRITQ DLSVQASYNY QDRENKTAQL DFPQVVTDSF HQGTEQNRLY DKRSKQFDLK
GKYRLTPSAY AEAGYSRDEV IYSELDRQSV DESGLFAKLS YRYSPAWSAW LKGEALDRNG
SEYNPVTSTQ SPSNPWLRKS YLADRKRQKV TLHTDYQSDI GLSVGASLHS IDDDYDHTLV
GLTQVSYLGY DVSAQYLISD NLSFNAYLNQ DWRDSDQAGS NRFSTPDWYS TSEEKSTLIG
AGLAYQNLLD NRLDLGLDYS YSDGQSDTEV TYGINSPYGD YYSRKHNINA YAKYKLADSM
SLRFDWLFEK YQDANWQNQN TTWDTVPNVL SFGDISHDYN AHYLGLTLSY QM
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