Gene Shewmr4_2502 details

Gene Information

• Locus tag: Shewmr4_2502
• ID: 4253073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-4
• Kingdom: Bacteria
• Replicon accession: NC_008321
• Strand: +
• Start bp: 2973210
• End bp: 2973806
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638119137
• Product: hypothetical protein
• Protein accession: YP_734630
• Protein GI: 113970837

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0019326
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.0107231
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATATTGA ATCACTTAAT GGGGTTATAC ACTCATCCAA AACAAGAGTG GCACGCGATT 
GAGAAGAATC ACGAGGCACT CAAAAGTAGC TTAAGTCACG TTATTCTCAT TGCACTGATT 
CCAGCTGTCT GTAGCTTTAT CGCCACTGCA TATATTGGTT GGAATCCGGG AGCGGGGGAT 
CCTATTTATC TCACTCCACA AAGCGCCATG TTTATGTCCG TCGGAATGTA CTTCGGTCTG 
ATTGCAGGTG TCTTTGCCCT AGCCTATTTA GCCTACTGGA TGGCAAAAAC CTTCGATGCC 
CAACCCACCT TCACGCAAGC CTTAGAGCTC GCATCCTACA CCGCAACGCC TCTATTTATG 
GTCGGTTTAG CCGCACTCTA TCCAGTACTC TGGTTCATTA TGATTGTTGG ACTCGTTGGC 
TTAGCCTACT CGGTCTATTT GCTATACGCA GGTGTGCCCA TCATTATGAA TATCCCTGAA 
GAGAAAGGCT TTATTTACGC CAGCTCTATG GTCACAGCCG GTTTAGTGCT CTTGGTCGGT 
TTAATGGCCA CTAGCGTTAT TCTCTGGAGT ATTGGCTTTG GCCCTATGTA TCAATAA 

 

Protein sequence

MILNHLMGLY THPKQEWHAI EKNHEALKSS LSHVILIALI PAVCSFIATA YIGWNPGAGD 
PIYLTPQSAM FMSVGMYFGL IAGVFALAYL AYWMAKTFDA QPTFTQALEL ASYTATPLFM 
VGLAALYPVL WFIMIVGLVG LAYSVYLLYA GVPIIMNIPE EKGFIYASSM VTAGLVLLVG 
LMATSVILWS IGFGPMYQ