Gene Shewmr4_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2472 
Symbol 
ID4253043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2941198 
End bp2941866 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content43% 
IMG OID638119104 
Productprimosomal replication protein N'', putative 
Protein accessionYP_734600 
Protein GI113970807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00169187 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTTTGA ACACTTCGCA GCTAATCAGC ACGTTGAAAA ATCAGCTCAC AACACTTGAG 
CAAGAGGTAC TGCAACATGA TAGTCATCTT GCGCCGAGCC AGCGTAAACT TCTGCAGGAT
ATTGAGCGCT TTAATCAGTC GCTGTTTATT CAAAATGGCG CCCAACTGAT GCCCTGCATT
GAACAAATTC GTAATAGTAT CTGTCAGTTA GAGAAACAAA TCGCCCTAAA ACTCGCGCCG
CAAACCATCG CCTTAAGCTG TGAACGTATT CAAGACCGTT TTACCGCGGT TAAACGAGCA
CTACTGACGA CCTCAATCGA TATAAAGTCT AAAAATCAAC AACGTGCCAG TAAACGCGCG
CGTTTTGCCC AACAACAGAC CCAATCGCAC CAAGCCAGTG GGTTTGCTTG GATTGCCAGC
AATGTGTTAC AAAATAGCCA CGAAATCTAT GCCGAACTGA ATAAGCATCT GAATTGGGCT
AAGAAATTTG AACAAAAAAT TGCAGAAATG GAATCAAAAC TTGAAAACTG TCATAGTGCT
GACAAAATCC GTTTGCAAAA TGACATCCTT TTGATGCATC GTCGTTTGGG TAAATGCAGG
CAAGCCATCA GTTATATCGA AGATCGCATT CAAGCATTCG AACGTCCGCA TCAGAGTCAT
AATCGTTAA
 
Protein sequence
MVLNTSQLIS TLKNQLTTLE QEVLQHDSHL APSQRKLLQD IERFNQSLFI QNGAQLMPCI 
EQIRNSICQL EKQIALKLAP QTIALSCERI QDRFTAVKRA LLTTSIDIKS KNQQRASKRA
RFAQQQTQSH QASGFAWIAS NVLQNSHEIY AELNKHLNWA KKFEQKIAEM ESKLENCHSA
DKIRLQNDIL LMHRRLGKCR QAISYIEDRI QAFERPHQSH NR