Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2472 |
Symbol | |
ID | 4253043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2941198 |
End bp | 2941866 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638119104 |
Product | primosomal replication protein N'', putative |
Protein accession | YP_734600 |
Protein GI | 113970807 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00169187 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTTTGA ACACTTCGCA GCTAATCAGC ACGTTGAAAA ATCAGCTCAC AACACTTGAG CAAGAGGTAC TGCAACATGA TAGTCATCTT GCGCCGAGCC AGCGTAAACT TCTGCAGGAT ATTGAGCGCT TTAATCAGTC GCTGTTTATT CAAAATGGCG CCCAACTGAT GCCCTGCATT GAACAAATTC GTAATAGTAT CTGTCAGTTA GAGAAACAAA TCGCCCTAAA ACTCGCGCCG CAAACCATCG CCTTAAGCTG TGAACGTATT CAAGACCGTT TTACCGCGGT TAAACGAGCA CTACTGACGA CCTCAATCGA TATAAAGTCT AAAAATCAAC AACGTGCCAG TAAACGCGCG CGTTTTGCCC AACAACAGAC CCAATCGCAC CAAGCCAGTG GGTTTGCTTG GATTGCCAGC AATGTGTTAC AAAATAGCCA CGAAATCTAT GCCGAACTGA ATAAGCATCT GAATTGGGCT AAGAAATTTG AACAAAAAAT TGCAGAAATG GAATCAAAAC TTGAAAACTG TCATAGTGCT GACAAAATCC GTTTGCAAAA TGACATCCTT TTGATGCATC GTCGTTTGGG TAAATGCAGG CAAGCCATCA GTTATATCGA AGATCGCATT CAAGCATTCG AACGTCCGCA TCAGAGTCAT AATCGTTAA
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Protein sequence | MVLNTSQLIS TLKNQLTTLE QEVLQHDSHL APSQRKLLQD IERFNQSLFI QNGAQLMPCI EQIRNSICQL EKQIALKLAP QTIALSCERI QDRFTAVKRA LLTTSIDIKS KNQQRASKRA RFAQQQTQSH QASGFAWIAS NVLQNSHEIY AELNKHLNWA KKFEQKIAEM ESKLENCHSA DKIRLQNDIL LMHRRLGKCR QAISYIEDRI QAFERPHQSH NR
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