| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2431 |
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| Symbol | |
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| ID | 4253002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2892811 |
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| End bp | 2894493 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119063 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_734559 |
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| Protein GI | 113970766 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000324417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0100076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTGA TCTTGCTCCT GACCCAACAG ATGTCACTCT ATTTGGTAAT AGTGTATCTG
GTCAGTAAAA CGCCGCTTTT TAAACTGTTC GCCGAAACAG CACCACGCCT GCCCCACAAG
GTGTTCATTT ATCTCATCTT TTCAAGCTTT TGCATCATGG CGACCTATTT TGGTGAGCAA
ACCTCGGGTG CCATTGCCAA TACTCGCGCC ATGGGCGCCG TGTTAGGTGG CTTACTCGGT
GGCCCTGTCA CCGGATTATT GGTTGGACTC ACGGGAGGTT TACACCGCTA CAGCATGGGC
GGCTTTACCG ATGTAGCTTG CGCCATCTCC ACTACCCTTG AGGGGTTCTC AGCGGGAATG
ATCAGCTTTT ATCTGCGCCG CGCGGGTAAG AGCGAGCTTA TCTACAATCC ACTCTTAGTC
TGTCTCGTAA CTTTCTACGC AGAAATGATG CAGATGAGCA TCATTTTGCT GATTGCTCGC
CCCTTCGATG ATGCCTGGGA GTTAGTACGG CAGATTGCGC CGCCGATGCT CTTAGTTAAC
TCCATAGGTG CAGCGCTATT TATGAGCATG ATCCGTGATC AAAAAACCAT GTTCGATAAG
CTCTCCTCCA CCTTCTCCAC CAAGGCGCTA AAAATTGCCG AGCGCAGCGT TGGCTTACTC
TCTAAGGGTT TTAACGAAGA AAGCAGCGGT AAGGTCGCAC AAATTGTGAT TGAAGAAACC
AATGTCGGCG CAGTAGCCAT TACCGATCGC GAAAAACTCT TAGCCTTTAT TGGCATAGGC
GCAGACCATC ATATTCCCGG CACGCCAATT TCCTCAAAAA TTACCCTTGA AGCCATCAAC
CAGAACAAAG TGATGTTTGC CGATGGGGTA GAGATGCCCT ACTCCTGCTC GATTTCGAGC
CAGTGTAAGC TCGGTTCGAG CCTTGTGATC CCACTTCGCA GCGACACCGA AGTCATAGGC
ACCATCAAGT TATACGAGCC TAAAAATAAA CTGTTCTTGA ACATTAACCG CACCTTAGGG
GAAGGTATTG CACGGCTATT ATCGAACCAA ATTCTGTATG GCCGCTTTGA ACAGCAGCAA
AATCTACTGA CCCAAGCCGA ACTCAAATTG CTGCAAGCTC AAGTGAATCC CCATTTTTTA
TTCAACGCAC TCAATACCAT CAGTGCGATT ATTAAGCGCG ATCCCGATAT GTCGAAGCAA
CTGTTGCAAC AGTTGTCGCA GTTTTTGCGG ATCAATTTAA AACGTACCAC AGGTTTAGTG
ACTCTCGGGG ATGAGCTTGA TCACATCGCC TCCTATCTCA CCATTGAGAA AGCCAGATTT
ATTGATAAAT TACAGGTAAA CATTGCTATC CCTGAGTCAC TCTATCACTG CAAAGTACCC
GCATTTACCC TGCAACCTAT CATTGAGAAC GCCGTAAAAC ACGGTACCTC CCATATGATT
GACCAAGGGC AAATCAAGGT GACAGGCCGG ATGGATGAAC AGGTATTGGT CTTAGACGTC
ACTGATAATG CGGGGCTTTA CCAACCCATT ATTGGCTCTG AAGGGCTAGG CATGAACTTA
GTCCATAAAC GGATCCAAAA CCTGTTTGGC GAGCAATATG GCATTCAGGT GGAATGCCAG
CCGGATGAGT ACACCAAAGT TACCATCCGC TTACCCATAG AACATACGGA AACTAGCACG
TGA
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| Protein sequence | MSLILLLTQQ MSLYLVIVYL VSKTPLFKLF AETAPRLPHK VFIYLIFSSF CIMATYFGEQ
TSGAIANTRA MGAVLGGLLG GPVTGLLVGL TGGLHRYSMG GFTDVACAIS TTLEGFSAGM
ISFYLRRAGK SELIYNPLLV CLVTFYAEMM QMSIILLIAR PFDDAWELVR QIAPPMLLVN
SIGAALFMSM IRDQKTMFDK LSSTFSTKAL KIAERSVGLL SKGFNEESSG KVAQIVIEET
NVGAVAITDR EKLLAFIGIG ADHHIPGTPI SSKITLEAIN QNKVMFADGV EMPYSCSISS
QCKLGSSLVI PLRSDTEVIG TIKLYEPKNK LFLNINRTLG EGIARLLSNQ ILYGRFEQQQ
NLLTQAELKL LQAQVNPHFL FNALNTISAI IKRDPDMSKQ LLQQLSQFLR INLKRTTGLV
TLGDELDHIA SYLTIEKARF IDKLQVNIAI PESLYHCKVP AFTLQPIIEN AVKHGTSHMI
DQGQIKVTGR MDEQVLVLDV TDNAGLYQPI IGSEGLGMNL VHKRIQNLFG EQYGIQVECQ
PDEYTKVTIR LPIEHTETST
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