Gene Shewmr4_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2424 
Symbol 
ID4252995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2888063 
End bp2888572 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content46% 
IMG OID638119056 
Producthypothetical protein 
Protein accessionYP_734552 
Protein GI113970759 
COG category[S] Function unknown 
COG ID[COG3216] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.433268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.183637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAA AATTAATCAA AAAATATATG CCTAAGCCTG AAACCCTGCG TGAGCACAAA 
CACCTACGCA TTTTCGGTCG CTTGTTACAT AACCCTAACC TGTGGGCGCT CAATCGTCGC
TCTGCCCCAG GAGCTTTTGC CATAGGTTTG TTCGTTGCTT GGATCCCGAT GCCTTTTCAA
ATGGTCGCTG CCGCTGCCTT TGCCATCCTA TTTAAAGTGA ATATCCCCGT ATCCGTTGCA
CTTGTGTGGA TAACGAATCC GCTAACCATG CCGGTTATGT TTTATGGGGC CTATTTATTG
GGCGCCAAAA TACTGGGCCA TGCTCCACAG GAATTTGCCT TTGAAGCTAG CTGGCAATGG
ATTGAATCTT CATTGGCAAC GATTGGCCCC GCATTTTTGC TTGGTTGCTT GGTTTTAGGA
GTGGTATTTT CCGCCGTGGG ATACCTGACG ATCAGTAATC TCTGGAAATA CTCCATCATG
TTTAAATGGC AAAAGCGTAA GACAAAATAG
 
Protein sequence
MPKKLIKKYM PKPETLREHK HLRIFGRLLH NPNLWALNRR SAPGAFAIGL FVAWIPMPFQ 
MVAAAAFAIL FKVNIPVSVA LVWITNPLTM PVMFYGAYLL GAKILGHAPQ EFAFEASWQW
IESSLATIGP AFLLGCLVLG VVFSAVGYLT ISNLWKYSIM FKWQKRKTK