| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2410 |
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| Symbol | sbcB |
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| ID | 4252981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2872472 |
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| End bp | 2873884 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119042 |
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| Product | exonuclease I |
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| Protein accession | YP_734538 |
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| Protein GI | 113970745 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2925] Exonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.210191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACAG CATCTCAGCC AAGTATTTTT TGGCACGATT ATGAAACCTT CGGAGCCACT
CCAGCCAAGG ACAGACCGGC CCAGTTTGCC GGGATCCGCA CAGACTTAGA TCTCAATATC
ATTAGTGAAC CCGAGACCTT TTACTGCAAA CAATCAACGG ATTATCTCCC CTCGCCCGAA
GCCATTTTAA TCACAGGGAT CACACCACAA TTAGCCAACT TAAAGGGGTT GCCTGAAACC
GAGTTTATGG GGCGCATCCA TGCACTCTTC AGCCAACCGA ATACCTGTGT CGCAGGCTAT
AACTCCCTAC GCTTTGACGA TGAAGTCACC CGTTATGGAT TCTACCGTAA CTTTATCGAT
CCCTATGCCC GCGAATGGCA AAATGGCAAT ACACGCTGGG ATATCATTGA TTTAGTGAGA
GCTTGCTATG CGTTTAGACC AGATGGGATT CATTGGCCAT TAAAGGAAGA TGGCTCGCCC
AGTTTTAAGT TAGAGCACCT GACGCAAGCC AATGGTTTAA GCCATGAAAA AGCCCACGAT
GCCATGTCCG ATGTGTACGC CACCATCGCC ATGGCCAAAT TAATTAAAGA AAAGCAACCC
AAGTTATATC AATACTATTT TGAGCTGCGC CGTAAGCAGG CCGTGAGTGC ACAAATCGAT
GTATTGAATA TGCAACCGCT TGCCCATGTG AGTTCCAAAA TCAGTGCGCT GCAGGGGTGT
ACGACGCTGA TAGCCCCCGT AACCCACCAT CCAAGCAACA AAAACGCCAT TATTTGCGTT
AACTTAGCGA TGGATTTAAG CCCGCTGTTT GAGCTGGATG TTGAGCAAAT AAAGACTCGC
ATGTATACGC CAAGAGCCGA GCTTGCCGAA GATGAGTTAC CTATACCGGT CAAACAAGTT
CATCTTAACA AATGTCCTTT TATCACCTCA GCCAAGATTT TGGATGATGC CCAGGCAGAA
AGACTCAATA TCGATAAAGC CTTTGCCAGA GAGCAATACA AACGCTTAAA AGCTCACCCA
GAATTGCGGG AAAAACTGGC GCAACTCTTT GAGCATGAAG GCGAAGTGAC AACCACTGAT
CCTGACTTGA TGCTGTATTC GGGTGGTTTT TTCAGCCCCG CCGATAAAGC CAAGATGGAG
ATCATTCGCC ATACCTTGCC ACAAAATTTA GCAGCGCTGG ATCTGCAATT TGATGATGGG
CGCATTCCCG AGATGCTGTT TCGCTATCGG GCACGTAACT ACCCAGAACT GCTGAATGAT
CAAGAAGCCC AGCGTTGGCG CATCTTCTGC CAGCAACGTT TGAGCGATCA GGATTATTTA
CTCAAGCTTG AAAATCTGCT GCAAGATACC GAGGCCGATG AGTACAAACA AAAGTTACTC
GCAGCCCTAT GTCACTATCT ACGCGGGCTC TAA
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| Protein sequence | MYTASQPSIF WHDYETFGAT PAKDRPAQFA GIRTDLDLNI ISEPETFYCK QSTDYLPSPE
AILITGITPQ LANLKGLPET EFMGRIHALF SQPNTCVAGY NSLRFDDEVT RYGFYRNFID
PYAREWQNGN TRWDIIDLVR ACYAFRPDGI HWPLKEDGSP SFKLEHLTQA NGLSHEKAHD
AMSDVYATIA MAKLIKEKQP KLYQYYFELR RKQAVSAQID VLNMQPLAHV SSKISALQGC
TTLIAPVTHH PSNKNAIICV NLAMDLSPLF ELDVEQIKTR MYTPRAELAE DELPIPVKQV
HLNKCPFITS AKILDDAQAE RLNIDKAFAR EQYKRLKAHP ELREKLAQLF EHEGEVTTTD
PDLMLYSGGF FSPADKAKME IIRHTLPQNL AALDLQFDDG RIPEMLFRYR ARNYPELLND
QEAQRWRIFC QQRLSDQDYL LKLENLLQDT EADEYKQKLL AALCHYLRGL
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