Gene Shewmr4_2349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2349 
Symbol 
ID4252920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2798712 
End bp2799092 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content49% 
IMG OID638118974 
Producthypothetical protein 
Protein accessionYP_734477 
Protein GI113970684 
COG category[S] Function unknown 
COG ID[COG3308] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0136957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000361738 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCTCAA GCACTCTGCT GACACTGAGC CGTTTAGGCT ACCTTGCCCT CGTTCTCCTG 
CTGGGCGGTT GGTTTATTGG TCAGGGCCTC AATGGGGAAT ACACCTTATT ATTCAGCCTA
CTCTGGCTAG TACCTCTGTT GCTGCCGTTA AGAGGAATTT TGAAGGGCAA CCCATACACC
TATGCATGGG CCAGCTTTAT TTTATGCTTA TATATGCTGC ACGCCCTCAC CTTGTTGTAT
GTCACGACCG ATGCATTGAC CTTTGCCATT ATCGAAGTCC TGCTGATTGG CACCCTGTTA
ATCGCGTTCC CATTTTATGC TCGTATCCGT GGGCGTGAAC TTGGCCTAGG TCTTAAGAAA
AAGTCCGACA AACAAGACTG A
 
Protein sequence
MTSSTLLTLS RLGYLALVLL LGGWFIGQGL NGEYTLLFSL LWLVPLLLPL RGILKGNPYT 
YAWASFILCL YMLHALTLLY VTTDALTFAI IEVLLIGTLL IAFPFYARIR GRELGLGLKK
KSDKQD