Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2349 |
Symbol | |
ID | 4252920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2798712 |
End bp | 2799092 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118974 |
Product | hypothetical protein |
Protein accession | YP_734477 |
Protein GI | 113970684 |
COG category | [S] Function unknown |
COG ID | [COG3308] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0136957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000361738 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCTCAA GCACTCTGCT GACACTGAGC CGTTTAGGCT ACCTTGCCCT CGTTCTCCTG CTGGGCGGTT GGTTTATTGG TCAGGGCCTC AATGGGGAAT ACACCTTATT ATTCAGCCTA CTCTGGCTAG TACCTCTGTT GCTGCCGTTA AGAGGAATTT TGAAGGGCAA CCCATACACC TATGCATGGG CCAGCTTTAT TTTATGCTTA TATATGCTGC ACGCCCTCAC CTTGTTGTAT GTCACGACCG ATGCATTGAC CTTTGCCATT ATCGAAGTCC TGCTGATTGG CACCCTGTTA ATCGCGTTCC CATTTTATGC TCGTATCCGT GGGCGTGAAC TTGGCCTAGG TCTTAAGAAA AAGTCCGACA AACAAGACTG A
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Protein sequence | MTSSTLLTLS RLGYLALVLL LGGWFIGQGL NGEYTLLFSL LWLVPLLLPL RGILKGNPYT YAWASFILCL YMLHALTLLY VTTDALTFAI IEVLLIGTLL IAFPFYARIR GRELGLGLKK KSDKQD
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