| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2324 |
|---|
| Symbol | |
|---|
| ID | 4252895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2772567 |
|---|
| End bp | 2773412 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638118949 |
|---|
| Product | methylglutaconyl-CoA hydratase |
|---|
| Protein accession | YP_734452 |
|---|
| Protein GI | 113970659 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACA CACAACACCA GAACACTAGC ACTCAATCCT TAGCTAATTT GCAGCACGTC
AGCTATACGC TGAATAATGG CGTGGGCGAG TTAATCCTTA ACCGAGCAGA AGTGCACAAC
GCCTTCGATG AGGTGATGAT CAGCGAAATG ATCGCCGTCC TCGGTTATTT TGCCGAGCAC
AAAGACTGCA AACTGCTGGT ATTAAAAGCC AATGGCAAAA ACTTCAGCGC AGGCGCCGAC
TTAAACTGGA TGCGCAAACA AGCCAAGATG GATTTTGATC AAAACCTGAA TGACGCCAAG
GCGCTGGCTA AGCTGATGCA GGATTTAGAT ACCTTTCCAA AACCCACTAT CGCCTTAGTC
CAAGGGGCAG CCTTTGGCGG CGCGCTTGGG TTAATTTGCG CCAGTGATAT TGCCATCGCT
ACTGAGCGCG CAAGCTTCTG CTTAAGCGAA GTCAAACTAG GGCTTATCCC TGCGGTGATT
AGCCCCTACG TTGCCCGCGC CATGGGCAAT CGCGCCTCAC GCCGCTATAT GCTGACCGCG
GAGCGTTTTG ATGCGCAAAC GGCGCTCAAA CTCAATGTTA TCCATGAGAT AAACGACGAT
TTAGCGGCCG CAGCAAAGCC CATTATCACC GCGCTGCTCG CCAACAGTCC CCAGGGAATG
GCATGGGTAA AGACCCTGCT CGCCTGCCTC GAAGACGGCG TGATAGACCA AGATACGATT
GATTACACCA GCGAGCGCAT CGCCCGCATT CGGGTATCTG ATGAAGGCCA AGAAGGTTTA
AACGCCTTTT TTGAGAAACG TCAGCCGAAC TGGCACACGC CAACAGATAC TCAAGGAGTT
CTTTGA
|
|---|
| Protein sequence | MTDTQHQNTS TQSLANLQHV SYTLNNGVGE LILNRAEVHN AFDEVMISEM IAVLGYFAEH
KDCKLLVLKA NGKNFSAGAD LNWMRKQAKM DFDQNLNDAK ALAKLMQDLD TFPKPTIALV
QGAAFGGALG LICASDIAIA TERASFCLSE VKLGLIPAVI SPYVARAMGN RASRRYMLTA
ERFDAQTALK LNVIHEINDD LAAAAKPIIT ALLANSPQGM AWVKTLLACL EDGVIDQDTI
DYTSERIARI RVSDEGQEGL NAFFEKRQPN WHTPTDTQGV L
|
|---|
| |