| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2299 |
|---|
| Symbol | |
|---|
| ID | 4252870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2743507 |
|---|
| End bp | 2744484 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638118924 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734427 |
|---|
| Protein GI | 113970634 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.187044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCC CTCGCAGAAC TCAAATAAGT CTTGAAGACA CGCCCTATTA CCATTGCTGT
AGCCGCGTTG TTCGGCGGGC ATTTTTATGT GGCGATGATG CCTATTCGGG TAAAAACTAT
GACCATCGCC GCGCTTGGGT AGAATCGCTA CTGTTTGAAC TTGAAGCAGT TTTTTCTATT
GATATCGCGG CATTTGCTGT GATGTCGAAT CATCTGCATG TGGTGTTGCG GGTGGATATC
GAGACGGCAA ATCGTTGGAC TGACCGCGAA GTTCTTGAGC AGTGGCATAA GTTGTTTAAA
GGCGATGAAT TAACGCAAAA ATTCGCTAAA GGTGAGTTAG TTGAAGCGCA TGAGGTGAAC
AGATTAAAGC ATTCAATTGC CATTTATCGC AGTCGTTTGT GTGATATTTC ATGGTTTATG
CGCTGTTTGA ATGAACCAAT AGCAAGGCAA GCAAATCAAG AAGATAACTG TACGGGCAGG
TTCTGGGAAG GTCGGTTTAA ATCCCAAGCC CTACTCGATG AAGCTGCGGT ATTAGCCTGT
ATGGCTTATG TGGATTTGAA TCCCATAAGA GCGAAACTCG CTGATACACC AGAACAATCC
GACCATACCA GTATTCAACT ACGTATTCGG GCCGCATTAA AAGGTGAGCA GCCAAGCAAT
CTCCTACCTT TTATCGGTAA CGAGTGCAAC GACCAACCCA ATGGCATTGC GTTTTCATTA
ACTGATTACC TTCTGTTGGT GGATGATACT GGTCGAATTA TTCGTAATGA TAAACGTGGA
TACATCAGTG AAAGTAGTGC CAAGATACTG ACAAAATTAA ATATCCCCCA TGACAATTGG
CTCAAGCTGA CTACCGAGTT TGGCAAGTTA TTTCATGGCC CTGTAGGTAC ATTGCAAGAG
CTGACCGATT ACTGCGAACA TCTCGAAAAG CGACGACGGC ATTTTGCGGC AAGCTGCCAG
CACTTTAACA GTAACTAA
|
|---|
| Protein sequence | MPRPRRTQIS LEDTPYYHCC SRVVRRAFLC GDDAYSGKNY DHRRAWVESL LFELEAVFSI
DIAAFAVMSN HLHVVLRVDI ETANRWTDRE VLEQWHKLFK GDELTQKFAK GELVEAHEVN
RLKHSIAIYR SRLCDISWFM RCLNEPIARQ ANQEDNCTGR FWEGRFKSQA LLDEAAVLAC
MAYVDLNPIR AKLADTPEQS DHTSIQLRIR AALKGEQPSN LLPFIGNECN DQPNGIAFSL
TDYLLLVDDT GRIIRNDKRG YISESSAKIL TKLNIPHDNW LKLTTEFGKL FHGPVGTLQE
LTDYCEHLEK RRRHFAASCQ HFNSN
|
|---|
| |