Gene Shewmr4_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2296 
Symbol 
ID4252867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2738331 
End bp2739596 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content49% 
IMG OID638118921 
Producthypothetical protein 
Protein accessionYP_734424 
Protein GI113970631 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.124232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAC TGATATTGGC CTTTGCCAGC GCGGCGCAGA GTATTGACGC TAACAGCTGG 
GACCGATTGA TGGGGACGGA TAATCCCTTC TGCCAGCATG CTTATTTCCT CAGCTTAGAG
CAGAGCTTGT CGGCCTGTGC CGCGACGGGC TGGCGCCCAC ATCATTTATG TGTGTTCGAC
GCAACTGGCA GTGAATTTGC GCGAGAATTA GCGCCAGATG CCGTTATTGT TAGCCAAAAA
GATGCCGCAG ATTTTATGGA TTTACCCCTG CTGGCATTGA TGCCGCTTTA TCAAAAATCC
CACTCCTATG GTGAATACGT GTTTGATTGG GCATGGGCGC AGGCCTATGA GCGCCATGGT
TTTGAATATT ATCCTAAATT GTTAAATGCC ATTCCATTTA CGCCGGTGCA GGGGCGGCGG
TTGGGGCTAT CGTCTACGCT TTTGGCAGAG GAAGCGCAGC AGCTAAGCTG CGCCGTATTT
ACCTGCTTAA ATGAGCAATT AGTGAACGTG GATGCGCCAA TGTCCTCGTG GCATTGCTTA
TTTGTCTCGC CTTCGCAGCA AACGCTATTT ACTGAGGCAT CCAATCCCAC TTCCCTTAAG
CGTTTAAGCA CCCAGTTCCA TTGGCATAAC CGTGGCTATA AAGATTTTGA AGCCTTTTTA
GCGGCGCTCA CCTCCCGTAA GCGTAAAAAT ATTCTTAAGG AGCGCGCCCA GCTACAGCCC
TATGGCTTGC AATATCAATT TGTCGCGGGA GCGGATATTA GCCGTCAGCA ATGGCAGCAT
TTTATTGAAT GTTATCAATT AACCTACCTT AAGCGCTCCG GCCATCGTGG CTATTTAACC
CCAACATTTT TTAACTTGAT TGCCGAGCGG TTGAGTGAGC AAATTGTTTT GCTCGTAATA
AGTGATGCGA AAGGGCAGAT GTTAGCGGGC GCGCTGTATT TTACGGGCCG CAACGAGCAA
GGGCAGACAT GCTTATTTGG TCGTTACTGG GGCAGTATTG TCGAGCTTGA GGGATTGCAC
TTTGAGGCCT GTTATTATCA GGGTATTGAA TACTGTATCG CCCATGGGAT TGATATCTTT
GATGCAGGCG CTCAGGGCGA ACATAAAGTG CTGCGCGGCT TCGAGCCTGT GGCGCTTTAT
TCCTACCACA ATATTGCTCA TCCCGACTTT AAGCGAGCCA TAGCGCATTT TACCGAGGAG
GAAGCTGCAC AAATGGAAGC GTATATGCAG CAGATGCGCG AGGTGTTGCC CTATAAAAAG
GGCTAA
 
Protein sequence
MRQLILAFAS AAQSIDANSW DRLMGTDNPF CQHAYFLSLE QSLSACAATG WRPHHLCVFD 
ATGSEFAREL APDAVIVSQK DAADFMDLPL LALMPLYQKS HSYGEYVFDW AWAQAYERHG
FEYYPKLLNA IPFTPVQGRR LGLSSTLLAE EAQQLSCAVF TCLNEQLVNV DAPMSSWHCL
FVSPSQQTLF TEASNPTSLK RLSTQFHWHN RGYKDFEAFL AALTSRKRKN ILKERAQLQP
YGLQYQFVAG ADISRQQWQH FIECYQLTYL KRSGHRGYLT PTFFNLIAER LSEQIVLLVI
SDAKGQMLAG ALYFTGRNEQ GQTCLFGRYW GSIVELEGLH FEACYYQGIE YCIAHGIDIF
DAGAQGEHKV LRGFEPVALY SYHNIAHPDF KRAIAHFTEE EAAQMEAYMQ QMREVLPYKK
G