Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2228 |
Symbol | |
ID | 4252801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2665393 |
End bp | 2666103 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638118854 |
Product | respiratory nitrate reductase chaperone NarJ |
Protein accession | YP_734358 |
Protein GI | 113970565 |
COG category | [C] Energy production and conversion |
COG ID | [COG2180] Nitrate reductase delta subunit |
TIGRFAM ID | [TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0195736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0393803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCAC TCAGGTTAAT AGCCCTATTG CTAGATTATC CCGAACAGGA GGTTTGGGAT AATGCACAGG AACTAAACCA TCTAATAAAA CAGTGTGCGG AACTAAACGA ATACCAAAAA GAACGTATTA ATCAATTTAT TGAACAAATG ACTCAAACTC CTTTAATGGA TTTACAGGCA CAATATGGTG ATTTGTTTGA GCGTGGTCGT TCTTTATCAT TATTACTATT TGAACACGTC CACGGTGAAT CCCGTGACCG TGGACAGGCA ATGATTGATT TACTCAACCA ATATAATGCA GCAGGAATGG TATTAACGGC TAAACAACTG CCCGACTATT TGCCAACCTA CCTCGAATAC TTGTCGCAAT TGACAGTGTA CGAGTCAATA AGCGGCTTAA AGGATGTCGC CCCAATTCTC GCGCTTCTCA AAGAGCGACT GAGTCAACGG CAGAGCTACT ACAGTAATTT ATTGCAGGTA TTAATCGAGC AATCTGGGGA GAAAATTGCA CAGGAAAAAC TGGCCGAGAC GGTGGCAAAT GAAGCCAAAG ATGACACACC GCAAGCACTC GATGCGGTGT GGGAAGAAGA GCAAATAAAG TTCTTGGGCG ATGAGGGATG CGCCTCAGTC CAACAAACTC TCCATCAAAA ACGATTTGCT CACGCCGTTG TTCCGCAATA CCTCGACACT AAAGCATTAA ACGGAGCGTA A
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Protein sequence | MTSLRLIALL LDYPEQEVWD NAQELNHLIK QCAELNEYQK ERINQFIEQM TQTPLMDLQA QYGDLFERGR SLSLLLFEHV HGESRDRGQA MIDLLNQYNA AGMVLTAKQL PDYLPTYLEY LSQLTVYESI SGLKDVAPIL ALLKERLSQR QSYYSNLLQV LIEQSGEKIA QEKLAETVAN EAKDDTPQAL DAVWEEEQIK FLGDEGCASV QQTLHQKRFA HAVVPQYLDT KALNGA
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