| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2207 |
|---|
| Symbol | |
|---|
| ID | 4252780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2637885 |
|---|
| End bp | 2640047 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638118833 |
|---|
| Product | polyphosphate kinase |
|---|
| Protein accession | YP_734337 |
|---|
| Protein GI | 113970544 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0855] Polyphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCCGA ATACCGATAA ACTGTCGATC GATAAAGAAA TCTCTTGGTT GTCATTCAAC
GAGCGGGTGC TGCAGGAGGC CTGTGATCCC AATGTGCCTA TCGTGGAGCG GGTGCGCTTT
TTAGGCATAT TCTCCAATAA TATGGATGAG TTCTTCCGGG TGCGGGTGGC CGCGGTCAGA
CGCTCAATTC TGCTCTCTGC GCTGCAGGAA GGTCGCAGCA ATAGCCGCCA TCTAATGGCC
AAAATTCAGA CCAAAGTCAT GGCATTGCAG GAACGTTTCG ACAGCATTTA CGTCGAGCTG
ATGCGTGAGT TAGTCCGCCG TAATATTTTG TTAATCAACG AAAAACAATT AAGCGAGTTC
CACAGTAACT GGCTTAAAAA ACATTTTCGC GATCACTTTA AACGCCATAT CGCGCCGCTT
ATCGTCAACA ACAATCGCGA CCTAGTGAAG CATATCAACG ACGACGCCAC CTATCTGTGC
GTGTGTTTAT TCACTAAATC CCGCAGACAA TATGCCCTCG TGGAAGTGCC CACTAAAAAT
GTGCCGCGTT TCATCGAGTT ACCCGCCGAA AAATCGAAGG CGAAAAAATA CTTGATCCTG
CTGGATAACA TTATTCGCCA CTGTGTGGAC GACCTATTTG GTCCCTTCTT CGAGTACGAG
GCCATTGAAG TCTATTCGAT GAAGCTGACC CGCGACGCCG AGTTCGATAT TACCGACGAA
CTTGAACAAA CCCAGCTCGA GAAAATGACC AAGGGTTTGA AAAAACGCCT GACCGCCGAA
CCCGTGCGTT TGGTGTACGA CAAAGAAATG CCCGAGCACA TGCTCGAAAT GCTAAAAGAA
AATTTAAACA TTAGCTCGAC TGAGTGTTTG ATCCCCGGCG GGCGTTACCA CAGCTTTAAG
GACTTTATCG GCTTCCCTAA CCCTAGCCGT GATTACCTCG AAAACGAAAA ATTGCCCGCC
CTCAATAGCT CGGGCTTTGG CCGCAGCGCC AACAGTTTCG ATGCGATCAA GATGGGCGAT
ATTATGGTCA ACTACCCGTA CCATAAGTTC TCCCACTTTA CCGAAATGGT GCGTCAGGCA
GCCTACGATC CTGCTGTGCG TTTTATTCGG ATCAACCTTT ACCGTGTTGC GAAAAAATCC
CATGTGATGC AATCACTTAT CGATGCGGTT AAAAATGGTA AACAAGTCAC CGCCGTGATT
GAGTTGCGGG CGCGCTTTGA CGAACAATCT AATATTGAGT GGACACGGGT GCTCGCCGAG
GCGGGTGTGA AGGTCCACCA TGGGATCACC AGCTTAAAAG TGCACTCTAA GTTGTGTTTG
ATTGGCCGCG AAGAGCAAGG CGAGATGAAA CTCTATTGCC ACGTAGGCTC AGGCAACTTT
AACGAAGGCA CGGCGCGGGT CTATACCGAC TTATCGCTAT TTACCGCCAA TCAGGAAATC
GCCCGCGAAG TGGAGCAAGT GTTCGACTTG ATTGAACATC CTTACCGCCG CGATAACTTC
CAGCATTTGA TTGTGTCGCC CTATGATGCG AGACAAAAAC TAACCCATTT GATCGATAAC
GAAATCGTCA ATGCCCAGAG CCATATTAAG GCGGCGATCA CCTTAAAATT GAATAACCTG
CTCGATGAAT CCTTAGTCCA AAAACTTTAC GAGGCCTCGG CTGCGGGAGT CAAAATCAAA
CTGTTGATCC GCGGTATGTG CTCGCTTATT CCACAAATTC CGGGGATCAG CGACAACATC
GAGATCTACA GTATTGTCGA CCGATTTTTA GAACATTCAC GGGTGATGCT ATTCCACGCC
GGTGGTGAGA ATAAATTATT TATCAGCTCG GCCGATTGGA TGAGCCGCAA CATAGATAAC
CGCGTCGAAG TGAGTGTGCC TATTTATGAT CTGCGTCTAA AACAAATGGT GATGGATATT
TTATCGTTAC AGTTCAATGA CAACACTAAG GCGCGCATCA TCAATAAGGA GCAGAGCAAT
CCTTATCGTA ACCGCGGTAA TAAACGTAAA GTGCGTTCTC AAATTGCCAT TTATCAATAT
CTGATTAATT ATGAGAAGCG GTTGCAGCAA GAATTTAGCG CCCAGCGCGA AGCCGCAAAG
CTTGAAGCGG AGCACGCGGC GGAACTTGCC CACAATCCCG AATTACAGGC CAAAGCCAGC
TAA
|
|---|
| Protein sequence | MSPNTDKLSI DKEISWLSFN ERVLQEACDP NVPIVERVRF LGIFSNNMDE FFRVRVAAVR
RSILLSALQE GRSNSRHLMA KIQTKVMALQ ERFDSIYVEL MRELVRRNIL LINEKQLSEF
HSNWLKKHFR DHFKRHIAPL IVNNNRDLVK HINDDATYLC VCLFTKSRRQ YALVEVPTKN
VPRFIELPAE KSKAKKYLIL LDNIIRHCVD DLFGPFFEYE AIEVYSMKLT RDAEFDITDE
LEQTQLEKMT KGLKKRLTAE PVRLVYDKEM PEHMLEMLKE NLNISSTECL IPGGRYHSFK
DFIGFPNPSR DYLENEKLPA LNSSGFGRSA NSFDAIKMGD IMVNYPYHKF SHFTEMVRQA
AYDPAVRFIR INLYRVAKKS HVMQSLIDAV KNGKQVTAVI ELRARFDEQS NIEWTRVLAE
AGVKVHHGIT SLKVHSKLCL IGREEQGEMK LYCHVGSGNF NEGTARVYTD LSLFTANQEI
AREVEQVFDL IEHPYRRDNF QHLIVSPYDA RQKLTHLIDN EIVNAQSHIK AAITLKLNNL
LDESLVQKLY EASAAGVKIK LLIRGMCSLI PQIPGISDNI EIYSIVDRFL EHSRVMLFHA
GGENKLFISS ADWMSRNIDN RVEVSVPIYD LRLKQMVMDI LSLQFNDNTK ARIINKEQSN
PYRNRGNKRK VRSQIAIYQY LINYEKRLQQ EFSAQREAAK LEAEHAAELA HNPELQAKAS
|
|---|
| |