Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2170 |
Symbol | |
ID | 4252743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2599746 |
End bp | 2600204 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638118796 |
Product | hypothetical protein |
Protein accession | YP_734300 |
Protein GI | 113970507 |
COG category | [S] Function unknown |
COG ID | [COG2983] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000858239 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAA GCGTAAACAT GGCATTTTGG CAGAATAAAG CGTTAACCGA ATTGACGTCG CAGGAGTGGG AGTCCCTCTG CGATGGTTGT GGTAAGTGTT GTTTAAACAA GTTGATCGAT GATGAAACTG AAGAGTTGTA TTACACCAAT GCAGCTTGCC TACTGCTCGA TCATCAAAGT GCTAGCTGCA AGCATTATAG TGACCGTTTT AGCCATGTTC CCCAATGTAC TGTGATCACA CTGCAAAACG TCCATGAACT GACGTGGTTA CCCGATAGCT GTGCCTATCG TCGTTTAGCC GCCGGTCGAG AATTACCAAG CTGGCATCCA TTACTTACTG GCTCTAAAGA AGCCATGCAC CTTGCGGGTA TGTCGATTCA AGGCAAAGTG GTGGATGAGC GCAGGGTGAA AGATATTGAA GATCATATCG TGCTGTGGCC GCTGAAAGAT CTAGATTAA
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Protein sequence | MKISVNMAFW QNKALTELTS QEWESLCDGC GKCCLNKLID DETEELYYTN AACLLLDHQS ASCKHYSDRF SHVPQCTVIT LQNVHELTWL PDSCAYRRLA AGRELPSWHP LLTGSKEAMH LAGMSIQGKV VDERRVKDIE DHIVLWPLKD LD
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