Gene Shewmr4_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2170 
Symbol 
ID4252743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2599746 
End bp2600204 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content46% 
IMG OID638118796 
Producthypothetical protein 
Protein accessionYP_734300 
Protein GI113970507 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000858239 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA GCGTAAACAT GGCATTTTGG CAGAATAAAG CGTTAACCGA ATTGACGTCG 
CAGGAGTGGG AGTCCCTCTG CGATGGTTGT GGTAAGTGTT GTTTAAACAA GTTGATCGAT
GATGAAACTG AAGAGTTGTA TTACACCAAT GCAGCTTGCC TACTGCTCGA TCATCAAAGT
GCTAGCTGCA AGCATTATAG TGACCGTTTT AGCCATGTTC CCCAATGTAC TGTGATCACA
CTGCAAAACG TCCATGAACT GACGTGGTTA CCCGATAGCT GTGCCTATCG TCGTTTAGCC
GCCGGTCGAG AATTACCAAG CTGGCATCCA TTACTTACTG GCTCTAAAGA AGCCATGCAC
CTTGCGGGTA TGTCGATTCA AGGCAAAGTG GTGGATGAGC GCAGGGTGAA AGATATTGAA
GATCATATCG TGCTGTGGCC GCTGAAAGAT CTAGATTAA
 
Protein sequence
MKISVNMAFW QNKALTELTS QEWESLCDGC GKCCLNKLID DETEELYYTN AACLLLDHQS 
ASCKHYSDRF SHVPQCTVIT LQNVHELTWL PDSCAYRRLA AGRELPSWHP LLTGSKEAMH
LAGMSIQGKV VDERRVKDIE DHIVLWPLKD LD