Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2156 |
Symbol | |
ID | 4252729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2584112 |
End bp | 2585536 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118782 |
Product | hypothetical protein |
Protein accession | YP_734286 |
Protein GI | 113970493 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03503] conserved hypothetical protein TIGR03503 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000672621 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.114824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGA CGACTCAGGG CAAAGATGCG CAGCCCAGTG ACACAAAAGC GACTGCCATT AAAGTCAATG AGGTTAATGC GAGTGCCGAT AAACCCGCTG ACGCAAAAGT AAACGCCGAA AAGCAAGTTG ATGCAAAACC GATCACGGAA GTTAAGGCAA AACCGCCCAA GCCTATGACT ACTCAAGCGG TGCCTGTGAG TACTGCTTCT GAACTTAAAA ATCGATTTAG AGTTGACCAT ATGGTCAGCA GTATGACGCT GTTGATCCAA CGGGAGTACG GCTCTGCGCC TGTGGTTATC GTTCTGCCCG ACGGCAGTAA GTGGTACGCC AATCGTCATC CAGAAACGGT AAAATGGGTC GATGGCATCA CCGGAGACAT CATTTATATC GAATCGCCTC AACCTGGCCC TTGGCAATTG GTGGGTAAGG TGGTTCCAGG TTCGCAACTC AAACGTGTCT CTAAACTTGA GATTGAAGTG CAGCAACTGC CACAGCCGTT ATTCCAAGGC GAAGAAGCCA AAGTCGTCGC CCAATTAATG GGGGATGCGG AGCGGGTACG CATGCCGGGG CTAGATTATT TAGTCGAGTG GACCGCGCAT TTTGTGAGTA AACATCGCGC TGGAGATGAG AACTTTGCCG CCGGTGACAT TATCGTCGGC TCTTACAAAG ATAATGGCGA AAAGTTCGAT GAAAGACCCG ACGATGGCAT GTTTACCAGC GATATCAATC TAAAACAGCC CTGGGGCGAG TACGATTTTG TGGTGCAGGC ACGTAACAAC GTGTTTGAGA GACAGGTTTC ATTTCCCTTT ACCTTATCTC CAAGGCCAGT TAATGCCGAG GTGATCACCC CAGAGGATCC CTTAACAGGA CAATGGAAAA TCATGTTGCA CGCCGATAGC AGTGTGCTGC AATTGGCTGA AACCCATTTC TCCTTCGAGC TTGTTGGGCC AGCAGGTTTA CAACTTCCTC TTGTGCTACA TGGGCTTAAG GAGAGTGAAA CTGAATTGCA AATACCGCCT GTTACCGAGT TTGGCAGCTA CCGGATTAAA GGCACTGTGG CGACAACGAC AGTCACGGGT CGTCAAATTA TGCTGGATTT ACCCGAACTC TTCTTTAACT TAGTTCAACC TCCTGAACCT CCACCGAGTG AAGAGGAGTT AGCCGCCGTT GCAGCCCAAA AAGCCGCTGA AGAAGAAGCC GTCGCAAAAC AGGATGCGCT GTTTTGGATC ATTACCATCA ATGCTGTGTT AATAGTGCTT GGCGTTGCGG GGCTGATTAT TTGGCGTAAG CGGCAGAGTT TAGCGCAGGC GCTAGCCGCT GCAGAGCAGC GTATGTTAGA TGAGGCGGAG CAGAATAAGC CTGAAGCCCC ATCCCTTGAT GAGATTGATT TAACGATGCC GGACGAGTCT GACCCGCGAA GATAA
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Protein sequence | MNLTTQGKDA QPSDTKATAI KVNEVNASAD KPADAKVNAE KQVDAKPITE VKAKPPKPMT TQAVPVSTAS ELKNRFRVDH MVSSMTLLIQ REYGSAPVVI VLPDGSKWYA NRHPETVKWV DGITGDIIYI ESPQPGPWQL VGKVVPGSQL KRVSKLEIEV QQLPQPLFQG EEAKVVAQLM GDAERVRMPG LDYLVEWTAH FVSKHRAGDE NFAAGDIIVG SYKDNGEKFD ERPDDGMFTS DINLKQPWGE YDFVVQARNN VFERQVSFPF TLSPRPVNAE VITPEDPLTG QWKIMLHADS SVLQLAETHF SFELVGPAGL QLPLVLHGLK ESETELQIPP VTEFGSYRIK GTVATTTVTG RQIMLDLPEL FFNLVQPPEP PPSEEELAAV AAQKAAEEEA VAKQDALFWI ITINAVLIVL GVAGLIIWRK RQSLAQALAA AEQRMLDEAE QNKPEAPSLD EIDLTMPDES DPRR
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