Gene Shewmr4_2151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2151 
Symbol 
ID4252724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2575091 
End bp2576335 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content45% 
IMG OID638118775 
Producthypothetical protein 
Protein accessionYP_734281 
Protein GI113970488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.176783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0532453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG CAATCATTGC TCTGTCATTG TTATCGATAA ACGCTGCTAT GGCAGCTAAT 
CTACCTGACT ATTTAGATGA GACGGATATA TACAATGCAC GGTTTAAGTG TTTGGGAGAA
CCTGTCAAGC ATTCGAAAGC AGATCAAAAT TATCTCGATA TGCTTTGGGA TGAGACGCTA
ACCTACCTTA AGGCCTACGC TATCGCGTTA ACCAATGGCG AAAACAGTCA CTGCCTGAAT
TCTGATGAGG CCATTGTCGA TTCGACCCTG AGTGCAAATA AGATGTGCAT TATGGATCGT
AGAGACATGC AGTTGATGGT GAAAAACATC TATCAGGTGA TCTACAACGC CGACAAGGCT
AAACAATGTT TCGGCGCCCG TGAAGAGGTT AATTGGATTT ATAACCCCGG TGGCGAATTA
ACCAAACACT CACCCGTTGC GCAGTATTTC AAGCGTACAA CGTTTGATGA ATTCTTTAAA
ACAAAGGTGA CAAATAAAGA GGTGCAGAAA TTAGGTCAGA TCTTCACTGA TAATTTCTAT
AAGATGGTCA CTGGTGATGA AGTGAAAATG CCCTCAGCCT TTCCATATGA TATCAGCGCC
AACACTCTAC CCAATTTGTG GGCAGCAGCA GGTTGGTTTC CTATGTATGC CGAAGAGAGT
AAGCGAAATG ATAAGAATTT TAACAACATC CGCGGTGGCT ATGCCTATGC TGAGATCTTC
GGTCATTGGG GATTACTCCG TATCGATGAG ATTAATGGTG AAAAGGTGGG TGCTGAAGTG
GGGATGACAG TACAGTTAGT CGATACGCTC TATCCCTATC ACAATCATGC GATTGCGGAG
ATCTACTACA ACATGCGCGT ACCCGCGTGT GCCAATCAAT TTAAGAGTTT TGCCGTACGT
GCTGATTCGC CCTTGCTCAA GACGGTGAAG CAAGATGACA AAATGCGCAG AGTGCAATTC
GATGCCGCAC AACACAATGG CCATACCATG TGGTTAGCCA GCAGCTATCA GCAAGATCCC
TTGATGTATT TCCACAAGAA CACAATACAT GCTTTTGATA TCGATGGTAG CTGTGAAGCT
AAGCCTCATG AGCGGGCTAT TGTCTCGGTT TGGGCCAGAA GTAATGCCCA TGACAAGCGC
AATGACTATG GAACGACACT GCTGTGTGAG TCGGCGAAAC ATCCAGGGAC TCCAGCAAAT
AAAGATGAGG TTATTCAGTG TGATCTGACT AACTTGAAGT GGTAA
 
Protein sequence
MKKAIIALSL LSINAAMAAN LPDYLDETDI YNARFKCLGE PVKHSKADQN YLDMLWDETL 
TYLKAYAIAL TNGENSHCLN SDEAIVDSTL SANKMCIMDR RDMQLMVKNI YQVIYNADKA
KQCFGAREEV NWIYNPGGEL TKHSPVAQYF KRTTFDEFFK TKVTNKEVQK LGQIFTDNFY
KMVTGDEVKM PSAFPYDISA NTLPNLWAAA GWFPMYAEES KRNDKNFNNI RGGYAYAEIF
GHWGLLRIDE INGEKVGAEV GMTVQLVDTL YPYHNHAIAE IYYNMRVPAC ANQFKSFAVR
ADSPLLKTVK QDDKMRRVQF DAAQHNGHTM WLASSYQQDP LMYFHKNTIH AFDIDGSCEA
KPHERAIVSV WARSNAHDKR NDYGTTLLCE SAKHPGTPAN KDEVIQCDLT NLKW