Gene Shewmr4_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2096 
Symbol 
ID4252669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2498383 
End bp2498676 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content41% 
IMG OID638118720 
Productanti-sigma-factor antagonist 
Protein accessionYP_734226 
Protein GI113970433 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATA TTTTCTATAT CTCTTTGCCT GAACGTTTTG ATTTTTATCA TCATAAAAAA 
TTCACCAGCG ACTATCAAAA AGCCTTTCTC GAAGAAGATA TTAAGCACTT AGTGTTGGAC
TTTAGCCGCG TGCTTTACAT TGATAGTTCG GCGCTGGGGA TGATGGTGCT GCTACATCGT
AAGGCGCTTG AGCGTCAGAT CAGCACTGCG ATTCGTGGAT TACATGGGCA AGCCGAAGAA
ATTATTACCA TTGCCAATAT GGGACGTTTG TATCTTGTTG AACGGGATGA ATAA
 
Protein sequence
MANIFYISLP ERFDFYHHKK FTSDYQKAFL EEDIKHLVLD FSRVLYIDSS ALGMMVLLHR 
KALERQISTA IRGLHGQAEE IITIANMGRL YLVERDE