| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2080 |
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| Symbol | |
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| ID | 4252653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2475513 |
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| End bp | 2476736 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118704 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_734210 |
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| Protein GI | 113970417 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGC TCGCCACATG GCAGGATAAA TGTATCGATA GCCAATTGCT GGTGGCAAGT
TTAGTGATGT TATTTAAGCA GCGTGAATTG GATACTGATA AGTTACTGCG CGGGACGGGG
ATTTTTATCG CGGATATTCG TAAACCCGAT CACCTTATTA GTCCCAAGCA ATTATCACGA
CTGCTGGATA ATGCGCTCTC CCTGTGGCCA AGCGGCGATT TAAGTTTTTT ATTGGGTCAA
CGTTGGTTGC CATCCCAAAG CGGCGCGCTG ACGGCGGCCA TGTTTTGCGC GCAGGATTTA
CAGGCATTAA GCCGCGTTTG GCATAAGTAT CATTGGCTCA CTCAGCCTTG GCTGCAAACT
TGGTGCTGCC AAGGCGAGCA TGAGTGGCAT TATCTCTTGA GTCTAGACTT AGGTATGCAG
CGCCATCGGC AGTTTTTGAT TGAGCTGAGT CTGTCGTCGC TTACCGCAGC CTGTAAGCAG
CTGCTTGGGC AAGCTTGGCG CGGCAGTCTG TGCTTTCCCT ACCGCGCGCC GGATAATTTG
GCCCATTACT ATAAATACTT TGGTACCGAC TTAAGTTTCG ATGCGCCCCT TTGCCGGATT
TCGATGACTA AAGCCCAGTT ACGCCAACCC TCATTATTTG CGCGCCAGAG CACGGCCTAT
GCCTTATCAA CTGGGGAAGA GAGGGATGAC AATCTCATTC ATAATGGTGT GATTCATCAT
GGCGCTAGTC ATTCTGTGGG TGACTCTTTA GCCATTGCAT CACAAGCAAT AGGAACTCAA
GCCACAGCGT CTCAAACTAT TGTATCTCAA CAGAATAGGC TGGATCAGGC GCCAAATATA
ATGTCAGCGT CGAATATCGC TCCTGCGCCG AATATGACCC AGGCGGCTCG CCAAGCGTTG
TTAACACACG AGTTTCGCCT TGGGTTGGCG GGAGGGATCC GCCTTAAACT GATGCGCAGC
ACTCTTTCCT TGCCAGAGAT GGCACAATCG CTGGAGATGA GCCCCGCAAC CTTAAAACGC
CGCCTGACGG AGATGGGCTT AAGTTACGGG CAACTTGCCG ACGAAACGCG TTTGATCCGG
GCGCTGTATT TTTTAGCCGA ACCCGAGCAA GACGCGCACA CGATTGCTAA TTCTCTATCC
TTCAGTGATG CCAGTAATTT CAGGCGTTCC TTTAAACGTT GGACAGGTCA ACTGCCTGCG
TATTTCCGCT TTTGGTTAGC CTAG
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| Protein sequence | MRALATWQDK CIDSQLLVAS LVMLFKQREL DTDKLLRGTG IFIADIRKPD HLISPKQLSR
LLDNALSLWP SGDLSFLLGQ RWLPSQSGAL TAAMFCAQDL QALSRVWHKY HWLTQPWLQT
WCCQGEHEWH YLLSLDLGMQ RHRQFLIELS LSSLTAACKQ LLGQAWRGSL CFPYRAPDNL
AHYYKYFGTD LSFDAPLCRI SMTKAQLRQP SLFARQSTAY ALSTGEERDD NLIHNGVIHH
GASHSVGDSL AIASQAIGTQ ATASQTIVSQ QNRLDQAPNI MSASNIAPAP NMTQAARQAL
LTHEFRLGLA GGIRLKLMRS TLSLPEMAQS LEMSPATLKR RLTEMGLSYG QLADETRLIR
ALYFLAEPEQ DAHTIANSLS FSDASNFRRS FKRWTGQLPA YFRFWLA
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