| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1988 |
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| Symbol | |
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| ID | 4252561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2364269 |
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| End bp | 2365486 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118601 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_734118 |
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| Protein GI | 113970325 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0171978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCT CAGCCGAAAC CCTATCATCC ACACGCATGT CCGCCGATTT GATCTCACCC
CAGATGAACG CATCTGAGGC GCATTCATCT GAGCGGCAAC CGCGGATGCA GGAAAGCGAC
AAGACCATGG TTCAAGAAAA AAACGCTCGT TACCAAGCGG GCAAGTCGAC CTCCATTGGT
CGATACCTGT GGCCACTATT GGCCTTAACT ATTCTGTTAC TGGCCAATCT GTTCATTGAC
AGCAGTTTCT TCAATATCAG CTATCAAGAC GACCGACTCT ATGGCTCTTT GATTGATATT
TTAAATCGCA GTGCACCCGT GGCGCTGCTC TCCATTGGCA TGAGTCTCGT GATTGCCACT
GGCGGTATTG ACCTGTCGGT TGGTGCCGTG ATGGCGATTG CGGGCGCGGT TTGCGCGAAT
CTACTGTTAG TGCCGGATAT CAGCTTAGTC ACCGTTATTG CAGCAGGCCT GATCGTTGGG
CTCTTAGCTG GCTGTATTAA TGGCGGTCTG GTGAGTTTCT TAGGCATTCA ACCAATTGTT
GCGACCTTGC TGCTCATGGT GGCGGGGCGC GGTGTCGCTC AGCTTATCAA CCAAGGACAA
ATTATCACCT TCCAGCACCC TGGCTTTGCC GCCATTGGCG TGGGCCAGTT TTTAGGCCTG
CCGATGCCAG TGTGGATTGT GATTGGGATG CTAACCTTCA GCCAATTACT GCTGCGTAAA
ACCGCTTTAG GGCTTTTTAT CGAAGCGGTT GGCTGTAATG CCAAGGCGAG TCGTTACCTT
GGGATCAACG ATAAATCCAT CAAACTGTTT GCCTATGGCA TTGCGGGTCT GTGTGCGGCC
TTAGCCGGCA TGATCAGCAC CGCCGATATC CAAGGGTCAG ATGCGAATAA CGCAGGGCTT
TGGCTTGAGC TCGATGCGGT GCTGGCCGTC GTAATTGGCG GCGCAGCGCT CACAGGCGGG
CGTTTCTCGT TAATTTTGTC GGTCGTCGGC GCGCTGATCA TTCAAACCTT AGCGACCACC
ATTATCGTCA GTGGTTTACC CGCTAAGTTT AACCTGCTGA TCAAAGCCAT CGTTATCCTG
ACCGTACTGC TGTTGCAATC GGCTAAATTT AGGCGCCAAT TGTCGGCGCT GTTCACATCC
AAGCGTCAAG CGAATGCTAA ACCAGCAGAA AAGGGCACAA GTGCAAAAGC CAGTACCGCA
ACAGGAGAAA AACTATGA
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| Protein sequence | MKSSAETLSS TRMSADLISP QMNASEAHSS ERQPRMQESD KTMVQEKNAR YQAGKSTSIG
RYLWPLLALT ILLLANLFID SSFFNISYQD DRLYGSLIDI LNRSAPVALL SIGMSLVIAT
GGIDLSVGAV MAIAGAVCAN LLLVPDISLV TVIAAGLIVG LLAGCINGGL VSFLGIQPIV
ATLLLMVAGR GVAQLINQGQ IITFQHPGFA AIGVGQFLGL PMPVWIVIGM LTFSQLLLRK
TALGLFIEAV GCNAKASRYL GINDKSIKLF AYGIAGLCAA LAGMISTADI QGSDANNAGL
WLELDAVLAV VIGGAALTGG RFSLILSVVG ALIIQTLATT IIVSGLPAKF NLLIKAIVIL
TVLLLQSAKF RRQLSALFTS KRQANAKPAE KGTSAKASTA TGEKL
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