| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1964 |
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| Symbol | |
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| ID | 4252537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2341456 |
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| End bp | 2342076 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638118576 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_734094 |
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| Protein GI | 113970301 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000066664 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.873937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGTTGTGTGC TGTGTTGTTA TCACCATTGT TATACAGCAA TGCAGTATTG
GCCGATGACG CAAAGCAATT ACGCGAAACC TTAAACGGCA CTGAGTCACT CAAGGCCGAT
TTCAAGCAAA CCGTTACCGA TATCAATAAA AAGGTCATCC AAACGGGCGC GGGTGTATTC
GCACTGGCCC ATCCAAACCA GTTTTATTGG CATTTAACCG CGCCCGATGA ATCCCAAATT
GTCGCCGACG GTAAAGATTT ATGGATCTAC AATCCCTTCG CCGAAGAAGT GGTGATTATG
GATTTTGCTG AAGCCATTAA TGCATCGCCC ATCGCCTTAT TGGTGCACCG CGATGACGCC
ACTTGGTCGC AATATAGCGT GACCAAAAAG CAAGACTGTT ATGAAATCAA ACCTAAGTCC
ACGGATGCGG GAATCACCTC GGTCAATGTC TGTTTTAACA AAGGTACACT GAATAAATTT
AATGTGCTCG ATGATAAAGG CAACCTGAGC CAATTTGACC TGAGTAACCA ACACAGCATT
AACGCCGCAG ATAAAGCGCT GTTTAAGTTT GTGTTGCCAG AAAACGTTGA TGTGGATGAT
CAACGTCTTA AAACCCAATA G
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| Protein sequence | MKKLLCAVLL SPLLYSNAVL ADDAKQLRET LNGTESLKAD FKQTVTDINK KVIQTGAGVF
ALAHPNQFYW HLTAPDESQI VADGKDLWIY NPFAEEVVIM DFAEAINASP IALLVHRDDA
TWSQYSVTKK QDCYEIKPKS TDAGITSVNV CFNKGTLNKF NVLDDKGNLS QFDLSNQHSI
NAADKALFKF VLPENVDVDD QRLKTQ
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