| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1891 |
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| Symbol | |
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| ID | 4252465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2251478 |
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| End bp | 2253385 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118502 |
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| Product | hypothetical protein |
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| Protein accession | YP_734022 |
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| Protein GI | 113970229 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.851379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.724529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAT CCATTTTAAC GGCTAGCCTG TTTGGCTGGT GTTTATCCTC CCTCGGTGCA
GCCTATGCTG CGCCAAGTCC TGTGCCGCTG CTGGTTGAGC AGTGTTTGCG CCAACCCAAT
ATCGATTTGG CTGGCGCCTT CGCCAGTTAC GTCAGCACCC ACCAGCTCCA AAGCTTAACA
CTGGCAGATA AGGCCCTAGT GTTAGAGCAG CAAACCATAG GGCTGAATAA TGTCAACGAC
AGACTCACCT ACTACCGAGG TTTGCCACTG TCGGGGGATG AGCGCCAAGG TTTACTGCAG
TGTCAGTTGC GCTTGGCCGA CACTTTGAGC GACTTACTAA ATCAGGCGGA ATTTAGCCAA
CTGGCGTTTG AGCTGACGCA AGCAGCATCG ATAAATCATG CTGCAGCAAG TCAGGAACAG
GCCTTGCTCG GCGAGCAATT AACGGCTTTA TTGCGCCAAC ATTTATCCAT TATGGATAAA
GCCAAGCTGC ACACGGCGCA GGCCAGCATT CGCCAAGGTT TAGGTAACCA GCAATTTCAA
CTGGATATTC AAGCGGCTAA CTGCCAGCTC ACGGATGAAG GAGCCGAGGT TAATACAGCC
AATAACGATG AAGAAACGGC AAATTCAGGC ACTTTTTCAG GGACTATCGC CAATTACCTG
TTAAAGCAAT CTAATGCCGA ATGTCGGCAA ACCCTGTGGC AAGCCTATCA AGGTCGAGCC
AGAGAACATA ATCAAGTCGC CTTACACCGC ATTGCCGAGC TACGCCAACG CATTGCCAAT
GACGCAGGTT TTAGCGATTA CGCCAGTTAC AGCCTAAGCG ATCAGCTACT CAATACCCCG
GAATTAGTTA AAGCGTTTCT CGATAGCCAA ACCGAAGCGA TTCAGGTTGC ACCTTGGGAT
CTTGGCCGTA CCTTATCGCA ATTACCCAGT GCGCAAACCA CCGCACTCAA TACCCGTGAG
CTGCTCGACA AGGCCTTAAC AAGCTTAAGC GAGTTTGGTT TACGTTTTGA GGTGATTAGC
GAGCATCTAG ACTCGGCAGC CACTCAAACG GCACTTTCTC AAACGGCACT CGCACAAGCG
CAGCAACAGA TCCTCCGTGT TTACCATATG GATAGATTAT TGGGAGAAGT ATATCTGGCT
ATCGGCGCTC AAGATAAAGT GAATAAATCT AGGAATGCCA GTCAACACAC CCTCAGACAA
AATGTGATTG GACAGCAATT TGGTCAACAG GCGCTTGAGC TCCCCGCGAC ACTTAATAAT
TTCAAAGATA TCGAACGCTT TACCCAAACC CTCGCCGATG CAATGACTTC ACTGGCGCGC
GGCAGTCATT TTTACCTTAA CAACACCTTA GGCCCGACGC TCGATACCAA TCAATTACCG
AGTCTTTGGC TCGCTAAGGT ATTACGCCAA ACGCTATTCC CCCAATTTGA TACCCTATAT
ATTCAGCCGA GGGAAACGCT CGCAAGCACC TATGCAACGC AGCTTAAAGT CTTTCGCGCT
AAGGTAGCAC TTAACTTTTA CCAGTCCTTA AACCAGCAAA GCTATCCGGA TCTGCCTGCT
GAGTTTAGCA AAAGCTTTGG GGCGAACTGG ACACAAGCGA TTGATTACCC ATACAGTTTC
AATGCAATCG CCAACGAAGG CCCACGTTAT TATCAATCCC TGTGGCAAGC CAAACTCGCA
ACGCTTGTCC ATCAATCCAC CCAAGACTGC CAAGATAAGC TTGGGCTTTT TAATCTCCTC
GTGGTCAATG AGACCGCACT CACCTTGAGC GAGCAACTGC GCGCCATACT TGGCGAACCC
GTGGATGCCG CTGCGCTTAT CCAAAGGATT ATCCATGTCT CAGGATCTGA AAATCACCCA
TACACCACAA CCGAAACACA AACTCACACT ACCCATTGCG CTTTTTAG
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| Protein sequence | MQKSILTASL FGWCLSSLGA AYAAPSPVPL LVEQCLRQPN IDLAGAFASY VSTHQLQSLT
LADKALVLEQ QTIGLNNVND RLTYYRGLPL SGDERQGLLQ CQLRLADTLS DLLNQAEFSQ
LAFELTQAAS INHAAASQEQ ALLGEQLTAL LRQHLSIMDK AKLHTAQASI RQGLGNQQFQ
LDIQAANCQL TDEGAEVNTA NNDEETANSG TFSGTIANYL LKQSNAECRQ TLWQAYQGRA
REHNQVALHR IAELRQRIAN DAGFSDYASY SLSDQLLNTP ELVKAFLDSQ TEAIQVAPWD
LGRTLSQLPS AQTTALNTRE LLDKALTSLS EFGLRFEVIS EHLDSAATQT ALSQTALAQA
QQQILRVYHM DRLLGEVYLA IGAQDKVNKS RNASQHTLRQ NVIGQQFGQQ ALELPATLNN
FKDIERFTQT LADAMTSLAR GSHFYLNNTL GPTLDTNQLP SLWLAKVLRQ TLFPQFDTLY
IQPRETLAST YATQLKVFRA KVALNFYQSL NQQSYPDLPA EFSKSFGANW TQAIDYPYSF
NAIANEGPRY YQSLWQAKLA TLVHQSTQDC QDKLGLFNLL VVNETALTLS EQLRAILGEP
VDAAALIQRI IHVSGSENHP YTTTETQTHT THCAF
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