| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1889 |
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| Symbol | |
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| ID | 4252463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2249275 |
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| End bp | 2250177 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118500 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_734020 |
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| Protein GI | 113970227 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.457269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCG CGAAATCCAC CCTTGAGCAA TGGCGTATTT TACAGGCTGT CGTCGACTAT
GGCGGCTACG CGCAGGCGGC AGAAAAGCTC AATAAGAGCC AATCCTCACT CAATCATGCG
GTGGCTAAGT TACAACACCA GCTCGGTATA GAGCTACTCG AAGTTCGAGG CCGCAAAGCT
TACCTGACAC CACAGGGCGA AGTATTATTG CGCCGATCGC GCCATGTGAC CCAAGCGGTC
AATGAGTTAG AACAACTCGC TAGCAACCTT GAGCAAGGTT GGGAGCCCAC ACTCACCATT
GCCCGCGAAA TCGTCTATCC GATGGAAAGT CTAGTGTGCG CACTAAGTGA CTTTTTGCCC
CATAGCCGCG GCACTCGGAT CATTATGTTG GACTCAGTCA TCACAGGTAC TCAAGAATTA
ATCCTTCAAA ATAAGGTCGA TATTGCAATT TGCGCCGGAA TTCCACCGAA GGGCTATTTA
TCCGAGCCCC TGTGTGAACA GGAGCTGCAT CTGGTTTGCC ACCCGAGCCA CCCCTTGGCA
GAAATGGGCA CCTTAGACGA TGACAAGCTA CTGGCGCAGC ACCTACAACT GGTGATCAAA
GACACGGGCC TGCAACCCAA TGTTGATATC GGTTGGTTGA AGGCCGAGCA GCGCTGGACA
GTATCGAACT TCCATGAGGC GAAAGTCATT TTAAATCAGG GCATTGGTTT CTGCTGGATC
CCGTCCTTTC TTATCCAAGA GGAATTAGCC GCAGGTAAAC TAGTGCGCTT ACACCTCCAA
GGCAGTCAGA AACGGCGGAT TATGCTAAGC CTAGTGATCC CGAATCGTGA CCAACAGGGC
CCCGCTTCAA AACTGCTAGC CTCTTATCTC CTCAAACATC ATGGTGTGAG TACAAGCGAA
TAA
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| Protein sequence | MTRAKSTLEQ WRILQAVVDY GGYAQAAEKL NKSQSSLNHA VAKLQHQLGI ELLEVRGRKA
YLTPQGEVLL RRSRHVTQAV NELEQLASNL EQGWEPTLTI AREIVYPMES LVCALSDFLP
HSRGTRIIML DSVITGTQEL ILQNKVDIAI CAGIPPKGYL SEPLCEQELH LVCHPSHPLA
EMGTLDDDKL LAQHLQLVIK DTGLQPNVDI GWLKAEQRWT VSNFHEAKVI LNQGIGFCWI
PSFLIQEELA AGKLVRLHLQ GSQKRRIMLS LVIPNRDQQG PASKLLASYL LKHHGVSTSE
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