| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1856 |
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| Symbol | |
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| ID | 4252430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2204612 |
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| End bp | 2205424 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118467 |
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| Product | peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins |
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| Protein accession | YP_733987 |
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| Protein GI | 113970194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.636269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000136741 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTAAACG CCACGCCACG CTTAGCCAAT ACTGCCCAGC TCTATGGAAT AGAAAGTGGA
ATAGAGAGCG GAATAGAGAG TGGGGTCACA AGCGGTTTAG ACACAGGCTT ACATACCGAC
TTATCCGCTG CTGTAACCCA AGAGTCAGCG CAGAGACTGC AATTTGTCGA ATTGCTGAGT
CCCCATCACC CGAGCGAAAC ACGCTTCATG CTGGAGGCTC AAACCGCCCT CGCCTTTAAG
GCGATGGCGG ACAGCGCCGC CACAGATGGA ATAGCCCTAG CGATTTGCTC AGCCTATCGT
CCTTTTGGCA GGCAACTCGC CATTTGGAAC GCCAAGGCCA GCGGTAAACG TGTTGTGCTG
GATATCAACG AGCAGCCAGT GGATATCAGT TCACTGAACG ATGATGAATT AGTCGATTTA
ATTTTGCTCT GGTCGGCACT GCCCGGCGCG TCACGTCATC ACTGGGGCAC GGACATCGAT
GTGTTTGATG CCAAGCAAAT CGAGGTAAAA TCCCTGCGTT TAGTGGAAGC CGAATACACT
GATGGCGGTC CCTGCGCCCA CTTGCACCAG TGGCTACTCC AGCACGCCAA GGATTTTGGG
TTTTATTTTC CTTTTCAGCG CGGTAAAAGC GCCGTCAGCG CCGAGCCTTG GCATATTAGC
TATTTCCCCG TGTCTCAAAC CCTGTTACCC CAATTTGAGG TGCAGGCCTT AGCGCAGGTT
ATCCAGCATA GCGATATGTT GCTTAAAGAA GCGGTGCTAG CCCGCTTACC TGTGCTTGTG
GCGGAATATG TACATCGAAT TGCAAAGCCT TAA
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| Protein sequence | MLNATPRLAN TAQLYGIESG IESGIESGVT SGLDTGLHTD LSAAVTQESA QRLQFVELLS
PHHPSETRFM LEAQTALAFK AMADSAATDG IALAICSAYR PFGRQLAIWN AKASGKRVVL
DINEQPVDIS SLNDDELVDL ILLWSALPGA SRHHWGTDID VFDAKQIEVK SLRLVEAEYT
DGGPCAHLHQ WLLQHAKDFG FYFPFQRGKS AVSAEPWHIS YFPVSQTLLP QFEVQALAQV
IQHSDMLLKE AVLARLPVLV AEYVHRIAKP
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