Gene Shewmr4_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1843 
Symbol 
ID4252417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2192977 
End bp2193462 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content49% 
IMG OID638118454 
Productperiplasmic nitrate reductase subunit NapB 
Protein accessionYP_733974 
Protein GI113970181 
COG category[C] Energy production and conversion 
COG ID[COG3043] Nitrate reductase cytochrome c-type subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.375611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000197655 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACAT TCAAATTAGT TTCAGCATTT AGTGCGCTTG CCTTTTCAGC CTTGATGATG 
ACCAGCGTGA CTGCGGCGAA CATTCCTGAG GATAAGGTTG ATACCTTACG TCTGGCGCCA
ATCAACGTTG AGCCAACTCC ACCTGCGATG CAGGCGGTGC TGAACAAAGA TATCAAAGAG
ATGCGTAACT ACCCGATGCA ACCACCGGTG ATCCCGCACA AGATCGATGG CTATCAGCTC
GATCTTAAGG TCAATAAGTG TATGTCATGC CATGCCAGAC ACCGCACCGG GGACTCTCAG
GCGCCTATGG TCAGTGTGAC TCACTATATG GATAGGGATA ACAACTTCTT AGCCGAGCTT
TCGCCAAGAC GTTACTTCTG CACTCAGTGC CATGTGCCGC AACTGGATGC CAAATTACTG
GTCGAGAACG ACTTTGTGGA TATGGATCAT CTGATTAAAG CCAACACAGA GCAGAAAACA
CACTAG
 
Protein sequence
MKTFKLVSAF SALAFSALMM TSVTAANIPE DKVDTLRLAP INVEPTPPAM QAVLNKDIKE 
MRNYPMQPPV IPHKIDGYQL DLKVNKCMSC HARHRTGDSQ APMVSVTHYM DRDNNFLAEL
SPRRYFCTQC HVPQLDAKLL VENDFVDMDH LIKANTEQKT H