Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1843 |
Symbol | |
ID | 4252417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2192977 |
End bp | 2193462 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118454 |
Product | periplasmic nitrate reductase subunit NapB |
Protein accession | YP_733974 |
Protein GI | 113970181 |
COG category | [C] Energy production and conversion |
COG ID | [COG3043] Nitrate reductase cytochrome c-type subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.375611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000197655 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACAT TCAAATTAGT TTCAGCATTT AGTGCGCTTG CCTTTTCAGC CTTGATGATG ACCAGCGTGA CTGCGGCGAA CATTCCTGAG GATAAGGTTG ATACCTTACG TCTGGCGCCA ATCAACGTTG AGCCAACTCC ACCTGCGATG CAGGCGGTGC TGAACAAAGA TATCAAAGAG ATGCGTAACT ACCCGATGCA ACCACCGGTG ATCCCGCACA AGATCGATGG CTATCAGCTC GATCTTAAGG TCAATAAGTG TATGTCATGC CATGCCAGAC ACCGCACCGG GGACTCTCAG GCGCCTATGG TCAGTGTGAC TCACTATATG GATAGGGATA ACAACTTCTT AGCCGAGCTT TCGCCAAGAC GTTACTTCTG CACTCAGTGC CATGTGCCGC AACTGGATGC CAAATTACTG GTCGAGAACG ACTTTGTGGA TATGGATCAT CTGATTAAAG CCAACACAGA GCAGAAAACA CACTAG
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Protein sequence | MKTFKLVSAF SALAFSALMM TSVTAANIPE DKVDTLRLAP INVEPTPPAM QAVLNKDIKE MRNYPMQPPV IPHKIDGYQL DLKVNKCMSC HARHRTGDSQ APMVSVTHYM DRDNNFLAEL SPRRYFCTQC HVPQLDAKLL VENDFVDMDH LIKANTEQKT H
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