| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1811 |
|---|
| Symbol | |
|---|
| ID | 4252385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2150433 |
|---|
| End bp | 2151371 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638118422 |
|---|
| Product | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
|---|
| Protein accession | YP_733942 |
|---|
| Protein GI | 113970149 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | [TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAAGAC AGCCCAAACA TTTTGACCGA CGTTTTAAAC TGGCGTTATT GCACCCTAAA
TATTGGGTTA CTTGGTTGGC GATCGGCCTA TTAGTGATTT TTGGGATCAT GCCCGCGTGG
CTGCGTGATC CTATCGCCAG AACCTTGGCC AAACTGGTGG CGCCTATTGC GAAAAAGCCG
ATAGGTATTG CTAGGGCGAA CTTAAGGGCG TGTTTCCCTG AAAAATCCGC CGCAGAGATA
GAAGCCTTAA TTGATGAGAA CGTGCAGAAC TTCGTCTTAG TGCTGTTATC TCAAGGTGAG
CTGTTGGTAC GATCTAAGGC GCATTTACGT CACCGCGTGA ATCTCATGGG CTTTGAGCAT
GTACAAGCGG CGCAGGCGTT AGGTCAACCA GTGATTTTCA TTATGCCCCA TGTGTGGCCC
ATCGATTATG CAGGGCTGAG GTTAAACCTC GAGCTACCTA TGGTTACTAT GGCTAAGGCC
CATAAAAACG CGTTATTTAA CTGGTTTAAT AATCGGGTAC GTAGCAGCTG CGGTGGTCAT
GTTTATATGC GAGAGGCGGG AATACGCGCC TTGTTGGCCG AATTGAAGCA GAACAATAGC
TTTTTCTACC TGCCCGATGA AGATTTAGGC CCAGAACAGA GCGTGTTTAC CCCGTTTTTA
GGCACAGTTA AAGCGACATT ACCCGTGGTT GGCCGCTTGG CTCAGGCGGG AAATGCCCAA
GTGCTGCCGG TGAAAATTGG TTATAACCAA GCTTCACGCC AGTTTGATTT AACTGTGATG
CCCGCCATTG CCGCCGAAGA CATGGTCGGT AAAGAAAACG AAGCGTTGGC ACTGAATAAA
GCGGTTGAGC AAGTGATCCT CGCATACCCT GAGCAATATA TGTGGTTCTT AAGATTGCTT
AAGACCCGCC CCGAAGGGCA AGCTTCGATT TATCAATAG
|
|---|
| Protein sequence | MSRQPKHFDR RFKLALLHPK YWVTWLAIGL LVIFGIMPAW LRDPIARTLA KLVAPIAKKP
IGIARANLRA CFPEKSAAEI EALIDENVQN FVLVLLSQGE LLVRSKAHLR HRVNLMGFEH
VQAAQALGQP VIFIMPHVWP IDYAGLRLNL ELPMVTMAKA HKNALFNWFN NRVRSSCGGH
VYMREAGIRA LLAELKQNNS FFYLPDEDLG PEQSVFTPFL GTVKATLPVV GRLAQAGNAQ
VLPVKIGYNQ ASRQFDLTVM PAIAAEDMVG KENEALALNK AVEQVILAYP EQYMWFLRLL
KTRPEGQASI YQ
|
|---|
| |