| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1806 |
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| Symbol | |
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| ID | 4252380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2142356 |
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| End bp | 2144305 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118417 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_733937 |
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| Protein GI | 113970144 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAC AACCTGATAT CCGCCTGCCG CGATTTTCCC GTAACGCCCT CACCTGCGCC
ATCGTCTTAA CTCTGAGCGC GGCCGCGACA CTCGCTCAAG CAGAAGATGA GCCCGATATG
GAGCGCATGG TCATCACTGC CACTCAAACA CAACACTCTG AGCTCTCGGC GCCAGCATCG
GTTTCGGTGA TCAATCGTAG TGAGCTTGAA GCTTTAGTGA TCGACGATCT CGCCAGCGCC
GTTCGCTATT TACAGGGAGT GAATATCAGT GAAGGTACGC CCTATGGCCG TAACGAAATC
AGCCTTCGCG GCCTAGATTC CGACTACACC TTAATCTTAA TCAATGGTCG CCGCGTCAAT
TCCCGTCAGG CGCTAACCTC CAACTACGGT AATGACTTTG ACCTATCGTC TATCCCCATG
TCAGCCATCG AGCGTATTGA ACTTGTCCGT GGCCCCATGT CGTCCCTCTA TGGCTCCGAA
GCTTTGGGCG GTGTAGTCAA CGTCATCCTA CGTCAACCGA CCGAAAGCTG GCAAACCAGT
ATTGGCGTGC AATACGACAC GCCAACCAGT GGTGAAGGTG GAGATAGCAC TAAATACAAC
TTCTACAGCA GCGGTGCGCT CATTAAAGAC AAACTGCTGG CGAACTTGAT TGTAGATAGC
AATAAACGTG ATGCATGGCG TTCTGACTTA AAACCGGCCA TAGATGCGCT TGAAGATAGG
GATGAAATCA GCGCCTTAGC CAATCTACAA TGGTTAATCG ACACGCAGCA GGATCTGCAA
TTTGATATCA GTTACGCCAA CGATGAGCGT GAATCCGATT GGAATAACTA CGGCACTATC
CTGACCAACA ACCAGCAGGC AGAACGGATC AGTTCAGGCC TTACCCATAA TGGCCGCTGG
GATTGGGGCG ATACGCGCTT ACGCTATTAT TATGAAAATG TCGAAGTGAC CGATAATTCG
GCGCTGATCG CACAAATTGG CCATATTACT CAAACAAACC ACAATCTTGA TGGGCAAACC
ACAGTGTTAC TCGGCGAACA TATGCTCACT GGCGGCGCCG AATACCGTTG GACCAAACTT
GAGAACAGCC GCAATATTTT AGGCGATGGC ACGCTAGACG ATAGCCAAGC GGCGCTGTAT
CTGCAGGACG AGTTCAGTTT AGGGGAGCTT AGCCTCACCC TCGGCGGGCG TGTCGATCAC
CACGATGTGT ATGGCACCGA ATTTAGCCCT CGTCTGTATC TGGTTTATCC GCTCAGTTCC
GAATGGGTAG TCAAAGGTGG TGGGGGTAAA GCCTTTAAAG CTCCGAATAT GTCGCAGTCT
CAAGCCGATT ATATTATCCC AGCCTGTCGC GGCGCCTGCT CTGTGGCCGG TAATGGCGAT
TTACAACCCG AAACCTCGGT GAACTACGAG CTATCGACCC AATATCAAGC GGACGATTTT
GGCGGTTCAG TCACCTATTT CCACAATGAT GTGGAAAACA AAATCATCAC CGAAACCTGG
GACAGAACCC CTGGCGCGGT ACTCACTTAT CAAAACGTTA GTGAAGCTAA GATTACCGGG
TGGGAATTGC AGGCATGGTA CGACTTAACC GACAGCTTAA GCCTGAGTGG CAACTACAGT
AAAACCGATG CCAAGGATAA GCAAAATGGT GCGCCTTTTA CCCTAACACC CGAAGATAGC
TATAACCTCA AACTGCAATG GCAAGCGCTG GAGGGATTAT CCACCTTTAT CGCCTACCAC
TACACGGGTG AACAATATCT GCGAGCTAAA GTAAAATCTG ATGGTTATGG CTCATTAGAT
ATCGGTGTTA ATTATCAAAT AAACCCAATG TTTAGAGTCA AACTAGGGGT GACTAACCTG
ACGGACGCCG AGCGCGATCA AATTGCCACC GATTTGGATT ACATTCAAAA GAGCCGCAGT
GTCTATGCTG GGGTAACGGC AAGCTTTTAA
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| Protein sequence | MPAQPDIRLP RFSRNALTCA IVLTLSAAAT LAQAEDEPDM ERMVITATQT QHSELSAPAS
VSVINRSELE ALVIDDLASA VRYLQGVNIS EGTPYGRNEI SLRGLDSDYT LILINGRRVN
SRQALTSNYG NDFDLSSIPM SAIERIELVR GPMSSLYGSE ALGGVVNVIL RQPTESWQTS
IGVQYDTPTS GEGGDSTKYN FYSSGALIKD KLLANLIVDS NKRDAWRSDL KPAIDALEDR
DEISALANLQ WLIDTQQDLQ FDISYANDER ESDWNNYGTI LTNNQQAERI SSGLTHNGRW
DWGDTRLRYY YENVEVTDNS ALIAQIGHIT QTNHNLDGQT TVLLGEHMLT GGAEYRWTKL
ENSRNILGDG TLDDSQAALY LQDEFSLGEL SLTLGGRVDH HDVYGTEFSP RLYLVYPLSS
EWVVKGGGGK AFKAPNMSQS QADYIIPACR GACSVAGNGD LQPETSVNYE LSTQYQADDF
GGSVTYFHND VENKIITETW DRTPGAVLTY QNVSEAKITG WELQAWYDLT DSLSLSGNYS
KTDAKDKQNG APFTLTPEDS YNLKLQWQAL EGLSTFIAYH YTGEQYLRAK VKSDGYGSLD
IGVNYQINPM FRVKLGVTNL TDAERDQIAT DLDYIQKSRS VYAGVTASF
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