Gene Shewmr4_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1801 
Symbol 
ID4252375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2137844 
End bp2138671 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content42% 
IMG OID638118412 
Producthypothetical protein 
Protein accessionYP_733932 
Protein GI113970139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA AAGCAAAAAG GATTTTATTC TCCACCTATT GGAAGAATGG TTGGATTGAC 
GCCAAAAATA GAAGTCTCCC CGAGTCCGAC TTTAACTACG CCAAATCGAA AGGATTAATG
TTTGATCCTT TAACTATCTC CCACGATGAA TGCATCCTTG CCATCACGGC GCTAGTGAAA
GACATATCGC AAACACAAGT AACAAAAGGA TTTTTAAGCA GTCTAACCTC TAGGCGATTG
GATTGGCGCT CATCCCTTGC ATCCTATGCG ATCGCCCAAA AAATCCCATC ACACCAATAT
GCGCCCGTCA TTTCAGGCAC TTCTTATACG GATGGCAAAC CAACGGCACA CTCCTATACC
TGTGGCATTT GCCGAGACAG TCAATATGGC ATCCGAGGAA GTGAATCCTA TAACGAGATG
GATATTAACG TATTCAATTT CGAGCGCATT AAATGGGGCG GCGTGCGCCA TGGCGATATT
TTGTATACCT ATTTTGATTT AAACCAATTT ATCAAGGCCG ATATTCCAGA GCCGACGTCA
GAAGATATTG TCTGTTTTAG GGAAATATTA ACGATTATCG AAACATCTGA GCCGAACGAT
TATCCCAGCG CATTGGAGAA AAGATTAGCG AGTGTAATAA AATCGAGCAA AGCTGAACGA
CAAATATTAA TCGAAATATT AGCCAGTCTG GGAATATTAA AACCCCGTTG TTTCGATAGA
CAACGCCAAG GCAAAAATGA CTGGGTATTT GCCGAATATT GGCGTGGTGA AGACAAATAT
TGCCAACAAA CAGTTGATCG CCTGTTTGGA GAATATTTAA CACGGTAA
 
Protein sequence
MDKKAKRILF STYWKNGWID AKNRSLPESD FNYAKSKGLM FDPLTISHDE CILAITALVK 
DISQTQVTKG FLSSLTSRRL DWRSSLASYA IAQKIPSHQY APVISGTSYT DGKPTAHSYT
CGICRDSQYG IRGSESYNEM DINVFNFERI KWGGVRHGDI LYTYFDLNQF IKADIPEPTS
EDIVCFREIL TIIETSEPND YPSALEKRLA SVIKSSKAER QILIEILASL GILKPRCFDR
QRQGKNDWVF AEYWRGEDKY CQQTVDRLFG EYLTR