Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1801 |
Symbol | |
ID | 4252375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2137844 |
End bp | 2138671 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638118412 |
Product | hypothetical protein |
Protein accession | YP_733932 |
Protein GI | 113970139 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAAAA AAGCAAAAAG GATTTTATTC TCCACCTATT GGAAGAATGG TTGGATTGAC GCCAAAAATA GAAGTCTCCC CGAGTCCGAC TTTAACTACG CCAAATCGAA AGGATTAATG TTTGATCCTT TAACTATCTC CCACGATGAA TGCATCCTTG CCATCACGGC GCTAGTGAAA GACATATCGC AAACACAAGT AACAAAAGGA TTTTTAAGCA GTCTAACCTC TAGGCGATTG GATTGGCGCT CATCCCTTGC ATCCTATGCG ATCGCCCAAA AAATCCCATC ACACCAATAT GCGCCCGTCA TTTCAGGCAC TTCTTATACG GATGGCAAAC CAACGGCACA CTCCTATACC TGTGGCATTT GCCGAGACAG TCAATATGGC ATCCGAGGAA GTGAATCCTA TAACGAGATG GATATTAACG TATTCAATTT CGAGCGCATT AAATGGGGCG GCGTGCGCCA TGGCGATATT TTGTATACCT ATTTTGATTT AAACCAATTT ATCAAGGCCG ATATTCCAGA GCCGACGTCA GAAGATATTG TCTGTTTTAG GGAAATATTA ACGATTATCG AAACATCTGA GCCGAACGAT TATCCCAGCG CATTGGAGAA AAGATTAGCG AGTGTAATAA AATCGAGCAA AGCTGAACGA CAAATATTAA TCGAAATATT AGCCAGTCTG GGAATATTAA AACCCCGTTG TTTCGATAGA CAACGCCAAG GCAAAAATGA CTGGGTATTT GCCGAATATT GGCGTGGTGA AGACAAATAT TGCCAACAAA CAGTTGATCG CCTGTTTGGA GAATATTTAA CACGGTAA
|
Protein sequence | MDKKAKRILF STYWKNGWID AKNRSLPESD FNYAKSKGLM FDPLTISHDE CILAITALVK DISQTQVTKG FLSSLTSRRL DWRSSLASYA IAQKIPSHQY APVISGTSYT DGKPTAHSYT CGICRDSQYG IRGSESYNEM DINVFNFERI KWGGVRHGDI LYTYFDLNQF IKADIPEPTS EDIVCFREIL TIIETSEPND YPSALEKRLA SVIKSSKAER QILIEILASL GILKPRCFDR QRQGKNDWVF AEYWRGEDKY CQQTVDRLFG EYLTR
|
| |