Gene Shewmr4_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1781 
Symbol 
ID4252355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2115588 
End bp2115935 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content43% 
IMG OID638118392 
ProductDNA repair nucleotidyltransferase/DNA polymerase-like protein 
Protein accessionYP_733912 
Protein GI113970119 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCCT TAGTCGATGC CAACTCGTTT TACTGCTCGG CTGAGCAAGT GTTCCGACCC 
GATTGGCGCG GTAAACCGAT TATCGTCCTA AGCAATAACG ATGGCTGTAT TGTGGCAGCC
AACCGTCAGG CTAGAGAACT TGGGATCCCC AAATTTGCGC CCTACTTTCA TGTCAAAGAA
CAGTGTGCCA AATTGGGAGT GATAGTATGC TCGAGTAACT ATGAACTTAC AGTTGGGAAT
TTTTTTAGAT GCCACATGTT GGAATTTTTC ATGATAAATA AATTAGACGA AGAGAAGAGA
GGTAGTTACA GTTTTACTGG ACTTTGTTTC CTAAATAGGT TGAACTAA
 
Protein sequence
MYALVDANSF YCSAEQVFRP DWRGKPIIVL SNNDGCIVAA NRQARELGIP KFAPYFHVKE 
QCAKLGVIVC SSNYELTVGN FFRCHMLEFF MINKLDEEKR GSYSFTGLCF LNRLN