Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1777 |
Symbol | |
ID | 4252351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2110902 |
End bp | 2111987 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638118388 |
Product | hypothetical protein |
Protein accession | YP_733908 |
Protein GI | 113970115 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAG TATTAACGGC TTTCTGGCAA CGCTGGTTGG CAAGGCGCAT GCCGCCCAGT TCTGAGTTTG TCCTCAGCCA TCGCAGCATC TTTATTCTGC CCAGTGGCTT TGGTTTAGTC TGGCTTGGGC TGGTACTGCT GCTGTATCTG TTTGGCACTA ACTATCAAAA CAATCTTGTA ATTGGCCTGA GCATTTTGCT CCTCAGTCTA TTTAATACCT GCATCCTTTA CAGTTATAAA AATCTCGCGG GTTTGCGCCT TCGCGCGCTC ACGGCGCCAG AGGTGTATGC GGGCGAAACC ATCACCTTTC CAGTCCTGCT CACCTCAAAT CACAGCAGCC ACAATATCAG CTTAAATTAC CCCAATAATT TAGCGTACTT ACTCAAACAG GTTGGCGCCG ATGAGGTGCA AGCTCTGGTC TCGTTTGCCC ATGACAGCCG TGGTCTGGTA TCGCCTGGCC GACTTAAGAT TGAATCCTTT TATCCCTTAG GGCTTTGCCG CGCTTGGTCC CATATTGATC TCGATAATGC GCACATCGTC TACGCCCACC CGATTGAAAG CCCTTTGCAG CTAAAGGCGG CGACCGAATC CGGTGAAGAC GAACGGTTAG AACGAGCAGG AAAGTACATC GCCGGCATCG ATGAATACAA AGGGCTTAAG CCCCATGTGC TCGGTGAATC TCTTAAACAA GTGGCATGGA AACAATGGGC TCAAGGGCGT GGCATGCTAA CCAAGGAGTT CGAGCAGCCT CAGGGCGATC CCGTATGGTT AACCTTAGTC CCCGATCCCG CGCAGCTTGA ACAGCAATTA GGTCAGCTCA GCTGGCAAGT CAACCATTTG AGTCAGCAGG AGCAATATTT TGGTCTGTGG CTGCAGCGTG TTGGGGCGGA AGATCTGATC CTCACACCCG ATATGGGCAA TGCCCATCGT ATCGCCTGCC AAAGGGCGCT CGCAATTTAC GGGCAAGATA TCAGCACGCT GGATAAAACC GATAAATTGA TGAATAACCA AGGTGTTAAG CATCAGCATC CGCTTCCTCC CCATGGGCAA GGCGTGCGTT CTGCAACAAT GGAGCCGCGG CGATGA
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Protein sequence | MKRVLTAFWQ RWLARRMPPS SEFVLSHRSI FILPSGFGLV WLGLVLLLYL FGTNYQNNLV IGLSILLLSL FNTCILYSYK NLAGLRLRAL TAPEVYAGET ITFPVLLTSN HSSHNISLNY PNNLAYLLKQ VGADEVQALV SFAHDSRGLV SPGRLKIESF YPLGLCRAWS HIDLDNAHIV YAHPIESPLQ LKAATESGED ERLERAGKYI AGIDEYKGLK PHVLGESLKQ VAWKQWAQGR GMLTKEFEQP QGDPVWLTLV PDPAQLEQQL GQLSWQVNHL SQQEQYFGLW LQRVGAEDLI LTPDMGNAHR IACQRALAIY GQDISTLDKT DKLMNNQGVK HQHPLPPHGQ GVRSATMEPR R
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