Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1729 |
Symbol | |
ID | 4252303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2054507 |
End bp | 2055538 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118340 |
Product | hypothetical protein |
Protein accession | YP_733860 |
Protein GI | 113970067 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.113297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.414715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTACGTC AACTCGCGGT CTCTATCGCT ACACTTATTG CACTTTCACA CAGTTCACTT GCCCGTGCTG AAGCTTGGTT CGAGGTTGAA GTCTATATTT TTGAACGCCA AAGCCAGTCG ACCGAACAAT GGCCGATGGC GCCAATTGAG ACCAAAACCA ACCGCGCTAT CGATCTGATT TCACCGGTTG TGGGTCAAGC TGTGGTCTCC ATGGGCAATG AATCCGCGCC CTGCACCTTA GTGTATGACG CCGATGCCAA TAGCCATTGC GCTGAAAACA CCAACACTGG TGCGAATACG GACGCCACTC CCGACATGAG TAACGGCGGC GCCTTGGCCA TTTCAGGCCC AAGCACTGCA AGCTCAAATG CGGTGACCAG CTATCGCTAT CCGAGTGTGA TCCCATCCGA AATCGGCAGT GGTAGCCAAG CCTACGCGTC TCAAGGTAGC GGCCCTGTGT TACTCGCCAG CAGCCAAGGC CAATTTGCAA GCATCATCAA TAGCCTATCG AGAGAACGTG GTAACCGCAG CTTACTGCAT ATGACATGGC AACAACCTAT GATGGGCAAG AGTGGCTCAG TGCCCATTCG CCTGTTTGCG GGTAAAGATT ATTCCGCCAG TTATCACTTC GATGGTCGTC AAATTGTGCA GCAAGCCATG GCCAGCGCTA TGCAAGGTGC TAACGGCACG ACTGGCATGA TGACAGAAAC ATCTGCGCCA CTACTGCCCT CTCCCGTGTG GCAACTCGAT GGCACGCTCA ATATTTATCT TAGCCATTAT CTGTATATCG AAACCGCGCT CAATTTGCGT AAAGAAGGCC GCAAATTGAT GCCTGCGGCA GCCGATGAAG CGAGCATAAA CACAGCAGCA ACAAGTACTG TCGCTGCCCC AGCTAAAGTG ATGACGCCTT ATTTAATGTC TATTCCTCTG GAGCAAAATC GTCGAGTGAA AAGTGATGAG ATCCATTATC TCGATCATCC TGAAATGGGC ATGGTGATCC AAATCCGTAA GATGGCGCAA CCTAACGCTT AA
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Protein sequence | MLRQLAVSIA TLIALSHSSL ARAEAWFEVE VYIFERQSQS TEQWPMAPIE TKTNRAIDLI SPVVGQAVVS MGNESAPCTL VYDADANSHC AENTNTGANT DATPDMSNGG ALAISGPSTA SSNAVTSYRY PSVIPSEIGS GSQAYASQGS GPVLLASSQG QFASIINSLS RERGNRSLLH MTWQQPMMGK SGSVPIRLFA GKDYSASYHF DGRQIVQQAM ASAMQGANGT TGMMTETSAP LLPSPVWQLD GTLNIYLSHY LYIETALNLR KEGRKLMPAA ADEASINTAA TSTVAAPAKV MTPYLMSIPL EQNRRVKSDE IHYLDHPEMG MVIQIRKMAQ PNA
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