| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1726 |
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| Symbol | |
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| ID | 4252300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2051873 |
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| End bp | 2052901 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118337 |
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| Product | beta-hexosaminidase |
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| Protein accession | YP_733857 |
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| Protein GI | 113970064 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.153905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATC TAATGTTGGA TCTGCTGTCT TTAGATGTTA GCGAAGCTGA AGCCGAGATG
CTGCGCCATC CGCAGGTGGG TGGTTTGATC CTGTTTTCCC GCAATTTTTC CAGCCGTGAG
CAGTTAATTG CCTTAGTGCA ACAGATCCGC CAAATTCGTC CCGAGATTTT GATTGCCGTT
GACCATGAGG GCGGGCGAGT ACAGCGTTTC CGTGAAGGAT TTACCCTGAT CCCGGCCATG
GGGGATATTT TGCCCGCGGC TAAGGGCGAT ATGGTTCTTG CTAAACGTTG GGCCTGTGAA
TTAGGCTTTT TAATGGCTAT CGAATTACTC GCCTGTGACA TCGACTTAAG TTTTGCGCCT
GTGCTCGATC TTAACGGCAT CAGCCAAGTC ATTGGTAAAC GTAGTTTTAG CGCAAAGCCC
GATGAAGTGA TTGCGTTAGC GCAGAGTTTT ATTGAGGGTA TGGCCGAGGC AGGCATGGGC
GCTGTGGGTA AGCATTTCCC CGGTCATGGT AGCGTGGCGG CGGACTCCCA TATCGCGCAA
CCTATCGATG AGCGTGAAGC TGAGGCGATT TTTAATCAAG ATATTTTGCC ATTTAAAGAA
CTGATTGCTA AGGGTAAATT ATCGGGCATT ATGCCAGCCC ATGTCATTTA CCCTAAAGTT
GACCCTAATC CTGCGGGCTT TTCAAGCTAC TGGTTAAAGC AGATCCTACG CAAAGAGCTG
GGCTTTAACG GGGTGATTTT CTCCGACGAT CTGGGGATGA AGGGCGCTGC CTTTGCAGGA
GATTATTTAG GCCGTGCCCA AGCTGCGTTG GATGCGGGCT GCGATATGAT TTTGGTCTGT
AACGATAATC CGGGCGTTAT GTCACTGTTA AATGGCTTTG TGTGGCCCGC CGCGGCGCCA
CAACATCCTG CGAGTTTACT CAAACCCAAT GCAGCGCAGA CAGCTATCGC ATTAGAAAAT
GCTAGCCGTT GGGAAAATGC CAAGCAGCTG GCTGAGCAAA TCCAACTCGC ACAACAGGCA
AAAGTTTGA
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| Protein sequence | MSYLMLDLLS LDVSEAEAEM LRHPQVGGLI LFSRNFSSRE QLIALVQQIR QIRPEILIAV
DHEGGRVQRF REGFTLIPAM GDILPAAKGD MVLAKRWACE LGFLMAIELL ACDIDLSFAP
VLDLNGISQV IGKRSFSAKP DEVIALAQSF IEGMAEAGMG AVGKHFPGHG SVAADSHIAQ
PIDEREAEAI FNQDILPFKE LIAKGKLSGI MPAHVIYPKV DPNPAGFSSY WLKQILRKEL
GFNGVIFSDD LGMKGAAFAG DYLGRAQAAL DAGCDMILVC NDNPGVMSLL NGFVWPAAAP
QHPASLLKPN AAQTAIALEN ASRWENAKQL AEQIQLAQQA KV
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