| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1655 |
|---|
| Symbol | metG |
|---|
| ID | 4252231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 1955161 |
|---|
| End bp | 1957191 |
|---|
| Gene Length | 2031 bp |
|---|
| Protein Length | 676 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638118267 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_733788 |
|---|
| Protein GI | 113969995 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000125111 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTT CACAACGTAA AATTCTCGTG ACCAGCGCAC TTCCCTACGC GAACGGACCG
ATTCATTTAG GTCACATGCT GGAATACATC CAGACGGATA TCTGGTCGCG TTATCAAAAG
CTTCGTGGAC ATGAGTGCCA CTATATTTGT GCCGATGACG CCCACGGCAC ACCGATTATG
CTCAAGGCGC AGCAATTAGG CATGGCGCCT GAAGAAATGA TCGCGCAAGT CAACAAAGAG
CATCAGCAGG ATTTTGCCGA TTTTAATATC GCCTTCGATA ATTATCACAG CACCCACAGT
GAAGAAAACC GCGTGCTGGC GAGCGATATT TACTTAAAAC TGCGCGCTAA TGGCTATATC
AAGAGCAAGA GCATTTCGCA GTTATTTGAC CCTGAAAAGT CGATGTTCCT GCCAGACCGC
TTCGTAAAAG GCACCTGCCC TAAGTGTAAA TCACCGGATC AATACGGCGA CAACTGCGAT
GCCTGCGGCG CAACTTACAG CCCAACTGAG CTGATTAACC CTAAGTCGGC CGTCTCTGGT
GCGACACCAG TGATGAAGGA CACTGAGCAC TTCTTCTTCG ACTTACCCGC TTTCGAAGAC
ATGCTCAAAG AGTGGACTCG TTCGGGTGCA CTGCAAACCG AAATGGCCAA CAAACTCGAT
GAATGGTTCG AACAGGGTCT GCAGCAATGG GACATCACCC GCGATGCGCC TTACTTTGGT
TTTGAGATCC CTGATGCACC GGGCAAATAC TTCTACGTAT GGTTAGATGC GCCTATCGGC
TACATGGGCT CATTCAAAAA CCTCTGTGAC AAACGCCCAG AGCTGAGCTT CGACGAATTT
TGGGCCAAGG ATTCTAAGGC CGAGGTTTAC CACTTTATCG GTAAAGACAT CGTTTACTTC
CACAGCCTGT TCTGGCCCGC CATGCTCCAT GGCTCGGGCT ACCGTCAACC TAACAGTGTC
TACGCCCACG GTTATGTCAC AGTGAACGGC GCTAAGATGT CTAAATCTAA GGGCACCTTT
ATTAAGGCGC GCACCTATTT AGACCACTTA GATCCTGAAT ATTTACGCTA CTACTACGCG
GCCAAACTCA GTAGCCGTAT CGACGATTTA GATTTAAATC TGGAAGATTT CGCCCAGCGC
GTGAATTCAG ATCTAGTTGG TAAGCTAGTG AACTTAGCCT CGCGCACCGC AGGTTTTATC
ACTAAGCGTT TCGATGGCAA GTTGGCCAAG ATTGCCGACA CCACACTCAC GGATGCGTTT
TTAGCGAAAC AAGAGCAAAT CGCCGAGTTT TATGAAACCC GCGAATACGG TAAAGCGATG
CGCGAAATCA TGGCGCTAGC CGATATCGCC AACGGTTTTG TCGCCGATGC GGCGCCTTGG
CAGTTAGTGA AGCAAGATGA TCAACAGGAA GTGGCGCACC AAGTGTGTTC AAACGCCCTG
AACCTGTTCC GCATTTTGGT GACTTACTTA AAGCCTGTGT TACCACGCTT AGCACAAGAC
GTTGAAGCCT TCTTCCAACA AACCTTAACT TGGGATGGCT TAGGACAAGA TATGGCGGGC
CACGAAATTG CGCCATTCAA AGCCATGATG CAACGTGTTG AGTTCGACAA AGTTGAAGCT
ATGGTGGCCG ACTCTAAAGA AAACCTGCAA GCCACGAGCG AGCCTGAAGC GCCTAAGGGC
CCATTGGCGA CCGATCCCAT TAGCGACACC ATCAACTTTG ATGATTTCGC GAAAATCGAT
CTGCGTATTG CGCGTATCGT TAAAGCCGAG CATGTGGCCG AAGCCGACAA ACTGTTGAAA
CTGCAATTGG ATATCGGCGG CGAAACCCGT CAGGTATTTG CGGGCATTAA ATCGGCCTAC
TCGCCTGAGG ATCTCGAAGG TAAGCTAACG GTGATGGTCG CCAACCTTGC ACCGCGTAAG
ATGCGTTTTG GCATGTCAGA AGGCATGGTA CTGGCCGCAG GCCCTGGTGG CAGCGATTTG
TGGATTCTAG AACCCCATGA AGGCGCACAA CCTGGCATGC GTGTGAAGTA A
|
|---|
| Protein sequence | MATSQRKILV TSALPYANGP IHLGHMLEYI QTDIWSRYQK LRGHECHYIC ADDAHGTPIM
LKAQQLGMAP EEMIAQVNKE HQQDFADFNI AFDNYHSTHS EENRVLASDI YLKLRANGYI
KSKSISQLFD PEKSMFLPDR FVKGTCPKCK SPDQYGDNCD ACGATYSPTE LINPKSAVSG
ATPVMKDTEH FFFDLPAFED MLKEWTRSGA LQTEMANKLD EWFEQGLQQW DITRDAPYFG
FEIPDAPGKY FYVWLDAPIG YMGSFKNLCD KRPELSFDEF WAKDSKAEVY HFIGKDIVYF
HSLFWPAMLH GSGYRQPNSV YAHGYVTVNG AKMSKSKGTF IKARTYLDHL DPEYLRYYYA
AKLSSRIDDL DLNLEDFAQR VNSDLVGKLV NLASRTAGFI TKRFDGKLAK IADTTLTDAF
LAKQEQIAEF YETREYGKAM REIMALADIA NGFVADAAPW QLVKQDDQQE VAHQVCSNAL
NLFRILVTYL KPVLPRLAQD VEAFFQQTLT WDGLGQDMAG HEIAPFKAMM QRVEFDKVEA
MVADSKENLQ ATSEPEAPKG PLATDPISDT INFDDFAKID LRIARIVKAE HVAEADKLLK
LQLDIGGETR QVFAGIKSAY SPEDLEGKLT VMVANLAPRK MRFGMSEGMV LAAGPGGSDL
WILEPHEGAQ PGMRVK
|
|---|
| |