| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1636 |
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| Symbol | |
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| ID | 4252212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1939224 |
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| End bp | 1940420 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118248 |
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| Product | 2-oxoglutarate dehydrogenase E2 component |
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| Protein accession | YP_733769 |
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| Protein GI | 113969976 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCG AAATCAAGGT ACCCGTACTG CCAGAATCTG TTGCCGACGC AACTATCGCC
ACTTGGCACG TAAAAGTGGG TGAGCAAGTT TCTCGTGATC AAAATCTGGT TGATATTGAA
ACTGACAAAG TCGTACTGGA AGTGGTTGCA CCAGAAGATG GTCACATCGG TGAGTTCCTG
TTCCAAGAAG GTGACACCGT TCTGGGTGAG CAAGTGATTG CTAAGTTCAT CGCGGGTGCG
GTTTCTGGTC AAGAAGTGAC TAAAGCCGAA GCTGAAGCTG CTGCACCTGT TGCCGCTGCT
GCGACTGAAG AGTCTAACGA TGCATTAAGC CCATCAGTCC GTCGTTTACT GGCTGAGCAC
AATGTTGATG CGAGCAAAGT GAAGGGCACT GGTGTCGGTG GCCGTATCAC TAAAGAAGAC
GTTGAAGCCT TTATCAAGTC TGCGCCTAAA GCAGCTGCTG CCCCTGCGGC TCCAGCTGTA
CAACCTTTAG CGGCAGGTCG TAGCGAGAAG CGTGTTCCAA TGACTCGTTT ACGTAAGACT
ATCGCTAACC GTTTATTAGA AGCGAAAAAC TCTACCGCGA TGCTCACGAC GTTTAACGAA
GTGAACATGA AGCCAATCAT GGATATCCGT AAGCAGTACC AAGATATCTT TGAAAAGCGC
CATGGTATCC GTTTAGGTTT CATGTCTTTC TACGTGAAAG CGGTAACTGA AGCACTGAAA
CGCTTCCCTG AAGTGAACGC ATCAATCGAC GGTGACGATA TCGTTTACCA CAACTACTTC
GACGTCAGCA TCGCTGTATC GACTCCACGT GGTCTGGTCA CCCCAGTACT GCGTGATACC
GATACCATGA GCCTGGCTGA TATCGAAAAA GCAGTACGCG ATCTGGCGAT CAAAGGCCGT
GATGGCAAGC TGACTGTGGC TGATATGACT GGCGGTAACT TCACTGTGAC TAACGGTGGT
GTATTCGGCT CGTTAATGTC TACCCCAATT TTAAACCTGC CACAAAGCGC GATTTTAGGC
ATGCACGCCA TTAAAGACCG CCCAATGGCA GTCAATGGTC AGGTTGAAAT CCTGCCCATG
ATGTACCTAG CTCTCTCATA TGACCATCGT ATTGTCGATG GCCGTGAGTC AGTTGGCTTC
TTAGTCGCCA TTAAAGACTT CTTGGAAGAC CCAACTCGTC TGCTACTTGA CCTATAA
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| Protein sequence | MSIEIKVPVL PESVADATIA TWHVKVGEQV SRDQNLVDIE TDKVVLEVVA PEDGHIGEFL
FQEGDTVLGE QVIAKFIAGA VSGQEVTKAE AEAAAPVAAA ATEESNDALS PSVRRLLAEH
NVDASKVKGT GVGGRITKED VEAFIKSAPK AAAAPAAPAV QPLAAGRSEK RVPMTRLRKT
IANRLLEAKN STAMLTTFNE VNMKPIMDIR KQYQDIFEKR HGIRLGFMSF YVKAVTEALK
RFPEVNASID GDDIVYHNYF DVSIAVSTPR GLVTPVLRDT DTMSLADIEK AVRDLAIKGR
DGKLTVADMT GGNFTVTNGG VFGSLMSTPI LNLPQSAILG MHAIKDRPMA VNGQVEILPM
MYLALSYDHR IVDGRESVGF LVAIKDFLED PTRLLLDL
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