| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1634 |
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| Symbol | sdhB |
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| ID | 4252210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1935434 |
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| End bp | 1936141 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118246 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_733767 |
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| Protein GI | 113969974 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.241417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGG AATTTGCAGT TTATCGTTAC AATCCTGATG TAGATACAAA ACCTTACATG
CAGGATTACA GCCTCGAAGT GGCTGAAGGC TCTGACATGA TGGTGCTTGA TGCACTGATC
AAGTTAAAAG AACAGGACCC AACGTTAGCG TTCCGTCGCT CATGCCGTGA AGGTGTTTGC
GGTAGTGACG GTGTGAACAT GAACGGTAAA AACGGTCTGG CTTGTATTAC GCCAATCTCT
ACCTTCAAAG GTAAGAAGTT GGAAATTCGT CCACTGCCAG GTATGCCAGT CGTACGTGAC
TTAGTGGTTG ATTTAACTCA GTTCTACAAG CAGTACGAGA AGATCAAGCC GTTCCTCATC
AACGATGAGA AGATGCCTGC TCGTGAACAT TTACAGTCAC CTGAACAGCG TGCGCATTTA
GATGGTCTGT ACGAATGTAT CATGTGTGCA TGTTGTTCTA CGGCTTGTCC ATCGTTCTGG
TGGAATCCTG ATAAGTTTAT CGGTCCTAGC GGTCTGCTAC ACGCATACCG TTTCTTGATC
GACAGCCGCG ATACAGCGAC AGAAGAACGT CTTTCTGAGC TGGACGACGC CTACAGCGTG
TTCCGTTGCC ACGGCATCAT GAACTGCGTT GACGTCTGTC CAAAAGGACT TAATCCGACT
AAAGCAATTG GTCACATTAA GTCAATGCTG CTTAAGCGAG CTGTGTAA
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| Protein sequence | MKLEFAVYRY NPDVDTKPYM QDYSLEVAEG SDMMVLDALI KLKEQDPTLA FRRSCREGVC
GSDGVNMNGK NGLACITPIS TFKGKKLEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPFLI
NDEKMPAREH LQSPEQRAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI
DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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