| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1609 |
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| Symbol | |
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| ID | 4252185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1904570 |
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| End bp | 1906096 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118221 |
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| Product | 6-phosphogluconate dehydrogenase |
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| Protein accession | YP_733742 |
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| Protein GI | 113969949 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC ACAGCAATCT TAATGACATT GGCGTGATTG GCCTTGGCGT GATGGGCAAA
AACCTCGCGC TAAACATTGC CGACAATCAA TATCGCGTCA GTGCCTTCGA CCTCGATCCT
GTTAAAGTCA ACGGTGTTTT ACAGCAAGAA AAACAAGAAC GTGTAGGACA GGATCTGCGA
ATTACAGGCT GTGCTAATCT TTCAGAAATG TTAGCAAGCC TCGCTCAACC CCGTATTCTC
GTGCTCTCAG TCCCTGCGGG GGCGCCTGTG GATGGGGTAT GTCATGCCTT GATTTCTGCC
GGTATCGAAG CGGACGACAT CGTTATCGAT ACGGGCAACA GTCTTTGGAC GGACACCGTT
GAACGCGAAA AGCGTTACCA AGGGAAATTT ATCTTCTTCA GCTCGGCGGT TTCGGGCGGG
GAAGTGGGTG CTCGTTTTGG CCCTTCATTA ATGCCAAGTG GCGATCTTGG AGCTTGGCAG
CATGTGGCGC CGATTTGGAA GGCCATTGCT GCTAAGGTTG ATCCTCAAAC TGGGCTGCCG
ATTGAGCGTT TTGAGCCGGG TAATCCCGTG ACCGAAGGTG AGCCTTGCAC GACCTATATT
GGTCCTGCTG GCGCCGGACA TTATGTGAAA ATGGTGCATA ACGGGATTGA ATACGCCGAT
ATGCAGCTGA TTTGCGAAGC CTATCAGTTA ATGCACGATG GCTTAGGCAT GAGTGCAGCT
CAAGTGGGTG AGGTGTTTGA ACGCTGGAAT AAGGGCAGTT TAAACAGCTA TCTGATGGGG
ATCAGCGCCG AGGTGCTCAA ACAGGCGGAT CCGCTAACCG GTCTGCCATT AGTTGAGATG
ATCCTCGATA AAGCTGGTCA AAAGGGCACT GGCCTTTGGA CTGCGGTGAG CAGTTTGCAA
ATTGGTTGTC CGGCTCCCAC TATTGCCGAA GCGGTTTATG CGCGCGCGGT GAGCACCCAA
AAATCCCTCC GTGTTGAGCT TAGTAAAAAG CTCGCAGGTC CTGTCTCTGT GGCGATGGAT
GATGCTCAAA AAGCCGTCTT AATCGATGCC TTAGAGAGTG CGCTCTATTG CGCTAAAGTG
TGTTGCTACG CGCAGGGCTT CCAATTGATG GCGATGACGG CGCAGGAGCA AAAATGGCAG
CTCGATTTTG CTGAAATCGC GAAGATTTGG CGTGCGGGTT GTATTATTCG TGCCACCTTC
TTGCAATCTA TCACTCAAGC TTATCAAGCG GATGCGGACT TAAGCTGTTT ATTGATGGCC
GACACCTTTG CAACTACCTT GTCGGAAAAA CAAACCGAGT GGCGCAGTGC TGTGGCGGCG
GCTGTGATGC AAGGGATCCC CGTGCCTTGC ATTAGTTCGG CATTGGCCTA TTACGACAGT
TATCGCAGCG AGACCCTGCC AGCAAACTTG CTTCAAGGTC AAAGGGACTT TTTCGGTGCC
CACACCTTTG AGCGCTCAGA TAAGCCCGCT GGCGAGAAAT ATCATTTAGA TTGGAGTGCC
CCAAACAGGG TATTAATCAA ACTCTAA
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| Protein sequence | MQNHSNLNDI GVIGLGVMGK NLALNIADNQ YRVSAFDLDP VKVNGVLQQE KQERVGQDLR
ITGCANLSEM LASLAQPRIL VLSVPAGAPV DGVCHALISA GIEADDIVID TGNSLWTDTV
EREKRYQGKF IFFSSAVSGG EVGARFGPSL MPSGDLGAWQ HVAPIWKAIA AKVDPQTGLP
IERFEPGNPV TEGEPCTTYI GPAGAGHYVK MVHNGIEYAD MQLICEAYQL MHDGLGMSAA
QVGEVFERWN KGSLNSYLMG ISAEVLKQAD PLTGLPLVEM ILDKAGQKGT GLWTAVSSLQ
IGCPAPTIAE AVYARAVSTQ KSLRVELSKK LAGPVSVAMD DAQKAVLIDA LESALYCAKV
CCYAQGFQLM AMTAQEQKWQ LDFAEIAKIW RAGCIIRATF LQSITQAYQA DADLSCLLMA
DTFATTLSEK QTEWRSAVAA AVMQGIPVPC ISSALAYYDS YRSETLPANL LQGQRDFFGA
HTFERSDKPA GEKYHLDWSA PNRVLIKL
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