Gene Shewmr4_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1560 
Symbol 
ID4252138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1841568 
End bp1842020 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content51% 
IMG OID638118174 
Producthypothetical protein 
Protein accessionYP_733695 
Protein GI113969902 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACAGT ATAAGATTTG GGTCGATGCC GATGCCTGCC CAAACCCGAT TAAAGAGATT 
TTATTTCGCG CGGCAGAACG TAAGTCGCTG CCGCTAGTGC TGGTGGCGAA CCAAATGCTG
CGGGTGCCAC CATCGCCTTA TATCAGCCAA GTGCGTGTCG GCTCAGGTTT TGATGTGGCA
GATCAATACA TTGTCGACCA TGTTGAGGCT ACGCATTTAG TGATCACCGC CGATATCCCG
TTGGCGGCGC AAGTGATTGA AAAGGGTGCG CTGGCGCTTA ATCCCCGCGG TGAGCTCTAC
ACCACTGACA ATATTCGCCA AAAACTGACG ATGCGCGATT TTATGGAAGA TTTACGTTCA
TCAGGTGTGC ATACCGGTGG TCCTGATGCC TTATCGGCGG CGGATAAACA GGCTTTTGCC
AATAGTTTAG ATAAGTGGCT GGTGCGAGTT TAA
 
Protein sequence
MGQYKIWVDA DACPNPIKEI LFRAAERKSL PLVLVANQML RVPPSPYISQ VRVGSGFDVA 
DQYIVDHVEA THLVITADIP LAAQVIEKGA LALNPRGELY TTDNIRQKLT MRDFMEDLRS
SGVHTGGPDA LSAADKQAFA NSLDKWLVRV