Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1555 |
Symbol | |
ID | 4252133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1835627 |
End bp | 1836466 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638118169 |
Product | hypothetical protein |
Protein accession | YP_733690 |
Protein GI | 113969897 |
COG category | [S] Function unknown |
COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATACAGA TAGGAAAAAC CTGCAAACTT GAGGTGGTAA AACAAGTCAG CTTCGGTGTG TATTTAAATG CCCACGAGTT TGGCCAAGTA TTACTGCCCA ACAAAGCCAC CCCAAAAGAT TGCCAAGTCG GTGACTGGCT AGAGGTATTT TTATATCTGG ACTCTGAAGA TATCGTCATT GCTACCACGC GCAAACCTTT GGCCCAAGTC GGTGAGTTTG CCTATTTAAA AGCGGTGGCA ACGGGTCCTT ACGGTGCATT TTTAGATTGG GGATTAGATA AAGATCTGTT GCTCCCCTTT GGCGAGCAGC ACAAACCCAT CGAAGAAGGC CGCTCTTACC TCGTTTACGT GCATGTTAAC CGCGCGGATG AACGTATTGT CGCCTCATCA AAAATCGATA AGTTCCTCGA TAAGACTCCA GCTCAGTACG AAGTGGGTCA ACAGGTTGAC TTGTATATCG GTGGCACCAC AGATTTAGGC TACAAAGCCA TTATTAACCA TGCCCACTGG GGCGTGATTT ACCAAAATGA AGTGTTCCAA AAGCTGCGTT TTGGTCAAAG AGTGAAAGGT TTTATCAAAC AAGTTCGCCG CGATGGCAAA ATCGATTTGG TCTTGCAGCA AGGCAGTAAG CAAGAGCTCG ATAAGCACGC GCACATTATT TTGGTGAAAC TCAAACAAGC TGGCGGTTTT TTACCCCTGA CCGATAAAAC CGATGCCGAA GTGATTTACG AGCAACTCGG CATGAGTAAA AAAGCCTTCA AAAAGAGCAT CGGCGGTTTG TTTAAAGCTG GTAAGTTAAG CATCGATGAC GATGGTTTAC GCCTGACTGA AGCAGACTGA
|
Protein sequence | MIQIGKTCKL EVVKQVSFGV YLNAHEFGQV LLPNKATPKD CQVGDWLEVF LYLDSEDIVI ATTRKPLAQV GEFAYLKAVA TGPYGAFLDW GLDKDLLLPF GEQHKPIEEG RSYLVYVHVN RADERIVASS KIDKFLDKTP AQYEVGQQVD LYIGGTTDLG YKAIINHAHW GVIYQNEVFQ KLRFGQRVKG FIKQVRRDGK IDLVLQQGSK QELDKHAHII LVKLKQAGGF LPLTDKTDAE VIYEQLGMSK KAFKKSIGGL FKAGKLSIDD DGLRLTEAD
|
| |